RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 SYVN1Q86TM6 617 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 KMT5CQ86Y97 462 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 VSTM4Q8IW00 320 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 CFAP206Q8IYR0 622 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 ENDOVQ8N8Q3 282 aaKnown RBP12.31□□□□□ -0.44
SKA1-205ENST00000494518 OR4E2Q8NGC2 313 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 OR13C4Q8NGS5 318 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 FCRL4Q96PJ5 515 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 PSMG3-AS1Q96PY0 264 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 CD180Q99467 661 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 FAM118BQ9BPY3 351 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 ANP32EQ9BTT0 268 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 GPR87Q9BY21 358 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 KLHL25Q9H0H3 589 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 ING2Q9H160 280 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 LRRC4CQ9HCJ2 640 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 KCND1Q9NSA2 647 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 SMOXQ9NWM0 555 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 VPS4AQ9UN37 437 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 ALG6Q9Y672 507 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 DNMT3AQ9Y6K1 912 aaPredicted RBP12.31□□□□□ -0.44
SKA1-205ENST00000494518 MYO9AB2RTY4 2548 aa12.31□□□□□ -0.44
SKA1-205ENST00000494518 ITPR2Q14571 2701 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 GSAPA4D1B5 854 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 A6NL46 340 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 TMEM150CB9EJG8 249 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 SGTAO43765 313 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 SRP72O76094 671 aaKnown RBP12.3□□□□□ -0.44
SKA1-205ENST00000494518 AGFG2O95081 481 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 PVRP15151 417 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 LPOP22079 712 aaPredicted RBP12.3□□□□□ -0.44
SKA1-205ENST00000494518 PSMB4P28070 264 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 LMAN1P49257 510 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 RAPSNQ13702 412 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 PTCHD3Q3KNS1 767 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 C4orf17Q53FE4 359 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 TFDP3Q5H9I0 405 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 TMTC4Q5T4D3 741 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 CAPRIN2Q6IMN6 1127 aaKnown RBP12.3□□□□□ -0.44
SKA1-205ENST00000494518 OR2L2Q8NH16 312 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 OR1L3Q8NH93 324 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 DTX3LQ8TDB6 740 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 THAP4Q8WY91 577 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 KRT35Q92764 455 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 CLIP3Q96DZ5 547 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 DCUN1D1Q96GG9 259 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 GBA3Q9H227 469 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 KIR3DX1Q9H7L2 352 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.3□□□□□ -0.44
SKA1-205ENST00000494518 MAP10Q9P2G4 905 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 CRLS1Q9UJA2 301 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 ACSL5Q9ULC5 683 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 SNX7Q9UNH6 387 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 SVILO95425 2214 aa12.3□□□□□ -0.44
SKA1-205ENST00000494518 DOCK10Q96BY6 2186 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 C2orf81A6NN90 581 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 ZNF185O15231 689 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 RECKO95980 971 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 PRSS56P0CW18 603 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 RNF224P0DH78 156 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 ST6GAL1P15907 406 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 GEMP55040 296 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 PRKAA1Q13131 559 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 SPARCL1Q14515 664 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 TAF1AQ15573 450 aaPredicted RBP12.29□□□□□ -0.44
SKA1-205ENST00000494518 BCL7AQ4VC05 210 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 PLEKHS1Q5SXH7 462 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 CCDC181Q5TID7 509 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 BPHLQ86WA6 291 aaPredicted RBP12.29□□□□□ -0.44
SKA1-205ENST00000494518 LURAP1LQ8IV03 231 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 KATNAL2Q8IYT4 538 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 DSELQ8IZU8 1212 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 FERD3LQ96RJ6 166 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 VAT1Q99536 393 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 XKR8Q9H6D3 395 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 FANCEQ9HB96 536 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 TRHDEQ9UKU6 1024 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 POMT2Q9UKY4 750 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 BTRCQ9Y297 605 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 CREBBPQ92793 2442 aa12.29□□□□□ -0.44
SKA1-205ENST00000494518 DIDO1Q9BTC0 2240 aaKnown RBP12.29□□□□□ -0.44
SKA1-205ENST00000494518 A1L4Q6 167 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 CCDC66A2RUB6 948 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 HACD1B0YJ81 288 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 MEN1O00255 615 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 BTN3A3O00478 584 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 BTN3A1O00481 513 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 ZRANB2O95218 330 aaKnown RBP eCLIP12.28□□□□□ -0.44
SKA1-205ENST00000494518 KLK3P07288 261 aaPredicted RBP12.28□□□□□ -0.44
SKA1-205ENST00000494518 CYP2A7P20853 494 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 MAGEA1P43355 309 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 PREPP48147 710 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 CDKN1CP49918 316 aaPredicted RBP12.28□□□□□ -0.44
SKA1-205ENST00000494518 ITGA1P56199 1179 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 XIAPP98170 497 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 OTUD4Q01804 1114 aaKnown RBP12.28□□□□□ -0.44
SKA1-205ENST00000494518 FHL5Q5TD97 284 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 FAM198BQ6UWH4 519 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 SYTL1Q8IYJ3 562 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 RNF214Q8ND24 703 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms