RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 GANCQ8TET4 914 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 WDR60Q8WVS4 1066 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 GLMPQ8WWB7 406 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 MRPL38Q96DV4 380 aaKnown RBP2.21□□□□□ -2.06
PTPN12-212ENST00000494248 RTP4Q96DX8 246 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 PERPQ96FX8 193 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 EEF2KMTQ96G04 330 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 PGAM5Q96HS1 289 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 ARL5BQ96KC2 179 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 CATSPER2Q96P56 530 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 DGAT2Q96PD7 388 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 PLIN2Q99541 437 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 RAD9AQ99638 391 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 EPYCQ99645 322 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 PIP5K1AQ99755 562 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 MGME1Q9BQP7 344 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 RIOK1Q9BRS2 568 aaKnown RBP2.21□□□□□ -2.06
PTPN12-212ENST00000494248 ABHD14AQ9BUJ0 271 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 STRA6Q9BX79 667 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 PUS3Q9BZE2 481 aaKnown RBP2.21□□□□□ -2.06
PTPN12-212ENST00000494248 POLR1EQ9GZS1 481 aaKnown RBP2.21□□□□□ -2.06
PTPN12-212ENST00000494248 LSG1Q9H089 658 aaKnown RBP2.21□□□□□ -2.06
PTPN12-212ENST00000494248 GLT8D2Q9H1C3 349 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 COQ10BQ9H8M1 238 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 PLAC1Q9HBJ0 212 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 KRCC1Q9NPI7 259 aaPredicted RBP2.21□□□□□ -2.06
PTPN12-212ENST00000494248 SPATS2LQ9NUQ6 558 aaKnown RBP2.21□□□□□ -2.06
PTPN12-212ENST00000494248 TMLHEQ9NVH6 421 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 BEX4Q9NWD9 120 aaPredicted RBP2.21□□□□□ -2.06
PTPN12-212ENST00000494248 SOHLH2Q9NX45 425 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 RAB20Q9NX57 234 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 CNIH4Q9P003 139 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 HCN3Q9P1Z3 774 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 ARMCX3Q9UH62 379 aaPredicted RBP2.21□□□□□ -2.06
PTPN12-212ENST00000494248 AMACRQ9UHK6 382 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 KCND3Q9UK17 655 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 INTS6Q9UL03 887 aaKnown RBP2.21□□□□□ -2.06
PTPN12-212ENST00000494248 MTMR6Q9Y217 621 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 DLGAP4Q9Y2H0 992 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 GDAQ9Y2T3 454 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 NAALAD2Q9Y3Q0 740 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 PTGDR2Q9Y5Y4 395 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 GMEB1Q9Y692 573 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 DDX49Q9Y6V7 483 aaKnown RBP2.21□□□□□ -2.06
PTPN12-212ENST00000494248 TNIKQ9UKE5 1360 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 WDR81Q562E7 1941 aa2.21□□□□□ -2.06
PTPN12-212ENST00000494248 ADGRF5Q8IZF2 1346 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 LOC100509620A0A075B734 347 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 FAM237BA0A1B0GVD1 139 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 HTR3EA5X5Y0 456 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PRR23AA6NEV1 266 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 OR2W5A6NFC9 320 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 OOEPA6NGQ2 149 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 FAM47DPA6NHR8 397 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 FAM90A20PA6NIJ5 464 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SRRM3A6NNA2 597 aaPredicted RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ENO4A6NNW6 628 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 BECN2A8MW95 431 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 A8MZ25 164 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 KCNJ18B7U540 433 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 H0Y8G0 127 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PEX12O00623 359 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 E2F3O00716 465 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 MEIS2O14770 477 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CIDEAO60543 219 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PPP6R2O75170 966 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 FLOT1O75955 427 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 AKR7A3O95154 331 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 KCNK5O95279 499 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 LARGE1O95461 756 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PRAMEF12O95522 483 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 POP4O95707 220 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 MMP2P08253 660 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CYC1P08574 325 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 FGF4P08620 206 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 VIMP08670 466 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 NCF1P14598 390 aaPredicted RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ZNF3P17036 446 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PRKACBP22694 351 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 AHCYP23526 432 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CTNNA2P26232 953 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 KLRK1P26718 216 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 MST1P26927 711 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ICAM3P32942 547 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 BMI1P35226 326 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 RFC2P35250 354 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CCT6AP40227 531 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PDLIM4P50479 330 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PRRX1P54821 245 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CDH15P55291 814 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 MAP3K7CLP57077 242 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CARD18P57730 90 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 OLR1P78380 273 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TFAP4Q01664 338 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SPIBQ01892 262 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 DMWDQ09019 674 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 GOLGA8DPQ0D2H9 430 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TROAPQ12815 778 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SF3A3Q12874 501 aaKnown RBP eCLIP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TMEM115Q12893 351 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms