RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 TWF1Q12792 350 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 LY6KQ17RY6 165 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 ATAD3CQ5T2N8 411 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 STEAP3Q658P3 488 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 FAM109AQ8N4B1 249 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 DNERQ8NFT8 737 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 OR5H6Q8NGV6 325 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 SELENOMQ8WWX9 145 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 SNAPC3Q92966 411 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 MTFMTQ96DP5 389 aaKnown RBP11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 RPRD1AQ96P16 312 aaPredicted RBP11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 COL21A1Q96P44 957 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 CCDC32Q9BV29 185 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 AASDHPPTQ9NRN7 309 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 THG1LQ9NWX6 298 aaKnown RBP11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 PCDH10Q9P2E7 1040 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 ZCWPW2A0A1B0GU75 182 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 NPEPPSL1A6NEC2 478 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 PRMT5O14744 637 aaPredicted RBP11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 PRKACAP17612 351 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 RPS3P23396 243 aaKnown RBP eCLIP11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 GSTM5P46439 218 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 GNPDA1P46926 289 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 SELPLGQ14242 412 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 KIAA1614Q5VZ46 1190 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 METTL4Q8N3J2 472 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 PIH1D2Q8WWB5 315 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 ANKRA2Q9H9E1 313 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 C1orf109Q9NX04 203 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 SPASTQ9UBP0 616 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 FAM8A1Q9UBU6 413 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 USP21Q9UK80 565 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
CRNKL1-204ENST00000490910 TTC34A8MYJ7 566 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 CASKO14936 926 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 MSCO60682 206 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 IFNA7P01567 189 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 C9P02748 559 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 NR2F6P10588 404 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 PTPN2P17706 415 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 XPAP23025 273 aaPredicted RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 CDK5R2Q13319 367 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 MAP1SQ66K74 1059 aaPredicted RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 CACTIN-AS1Q8N1I8 211 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 ESAMQ96AP7 390 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 OTUB1Q96FW1 271 aaPredicted RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 CRELD1Q96HD1 420 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 TBATAQ96M53 351 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 IL12RB2Q99665 862 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 XYLT2Q9H1B5 865 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 RNF19AQ9NV58 838 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 FKBP14Q9NWM8 211 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 COQ3Q9NZJ6 369 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 SLC2A6Q9UGQ3 507 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 SLC9A8Q9Y2E8 581 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 MAGED1Q9Y5V3 778 aaPredicted RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 RGPD5Q99666 1765 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 PRAMEF33A0A0G2JMD5 474 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 MGAT4DA6NG13 374 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 SLC7A4O43246 635 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 PRAMEF10O60809 474 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 ENDOD1O94919 500 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 PIRTP0C851 137 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 ITGB6P18564 788 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 UQCRC1P31930 480 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 CHRNA4P43681 627 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 SNAPC1Q16533 368 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 CELF3Q5SZQ8 465 aaKnown RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 SPATA2LQ8IUW3 424 aaPredicted RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 SYT12Q8IV01 421 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 LACC1Q8IV20 430 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 GPR65Q8IYL9 337 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 OR4L1Q8NH43 312 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 EMID1Q96A84 441 aaPredicted RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 TMEM125Q96AQ2 219 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 KATNAL1Q9BW62 490 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 NIFKQ9BYG3 293 aaKnown RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 FAM83DQ9H4H8 585 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 PTGDR2Q9Y5Y4 395 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 TNFRSF11BO00300 401 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 CREG1O75629 220 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 NDST3O95803 873 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 COX7A2P14406 83 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 INSRRP14616 1297 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 FPR1P21462 350 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 PIK3CGP48736 1102 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 SMARCB1Q12824 385 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 RAPSNQ13702 412 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 TSTQ16762 297 aaKnown RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 GARNL3Q5VVW2 1013 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 OR10Q1Q8NGQ4 319 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 DEDD2Q8WXF8 326 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 NELL1Q92832 810 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 SLCO4A1Q96BD0 722 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 LINGO1Q96FE5 620 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 TSSK3Q96PN8 268 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 UHRF1Q96T88 793 aaPredicted RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 CINPQ9BW66 212 aaPredicted RBP11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 COLEC11Q9BWP8 271 aa11.12□□□□□ -0.63
CRNKL1-204ENST00000490910 ADGRE3Q9BY15 652 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms