RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 SLC39A1Q9NY26 324 aa18.66■□□□□ 0.58
EPHB4-207ENST00000489808 FOXJ2Q9P0K8 574 aa18.66■□□□□ 0.58
EPHB4-207ENST00000489808 PCYOX1Q9UHG3 505 aa18.66■□□□□ 0.58
EPHB4-207ENST00000489808 SLC24A2Q9UI40 661 aa18.66■□□□□ 0.58
EPHB4-207ENST00000489808 LHX6Q9UPM6 363 aa18.66■□□□□ 0.58
EPHB4-207ENST00000489808 SSUH2Q9Y2M2 353 aa18.66■□□□□ 0.58
EPHB4-207ENST00000489808 PCDHGA3Q9Y5H0 932 aa18.66■□□□□ 0.58
EPHB4-207ENST00000489808 CFAP47Q6ZTR5 3102 aa18.66■□□□□ 0.58
EPHB4-207ENST00000489808 DSPP15924 2871 aaKnown RBP18.65■□□□□ 0.58
EPHB4-207ENST00000489808 GOLGA8MH3BSY2 632 aa18.65■□□□□ 0.58
EPHB4-207ENST00000489808 PTGIRP43119 386 aa18.65■□□□□ 0.58
EPHB4-207ENST00000489808 ARCN1P48444 511 aaKnown RBP18.65■□□□□ 0.58
EPHB4-207ENST00000489808 TTPAP49638 278 aa18.65■□□□□ 0.58
EPHB4-207ENST00000489808 MC2RQ01718 297 aa18.65■□□□□ 0.58
EPHB4-207ENST00000489808 PLCL1Q15111 1095 aa18.65■□□□□ 0.58
EPHB4-207ENST00000489808 FAM129CQ86XR2 697 aa18.65■□□□□ 0.58
EPHB4-207ENST00000489808 PPIL6Q8IXY8 311 aa18.65■□□□□ 0.58
EPHB4-207ENST00000489808 PHC3Q8NDX5 983 aa18.65■□□□□ 0.58
EPHB4-207ENST00000489808 TFGQ92734 400 aaPredicted RBP18.65■□□□□ 0.58
EPHB4-207ENST00000489808 ART4Q93070 314 aa18.65■□□□□ 0.58
EPHB4-207ENST00000489808 SERPINB12Q96P63 405 aa18.65■□□□□ 0.58
EPHB4-207ENST00000489808 SLC5A10A0PJK1 596 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 PRMT5O14744 637 aaPredicted RBP18.64■□□□□ 0.57
EPHB4-207ENST00000489808 FANCGO15287 622 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 PLOD1Q02809 727 aaPredicted RBP18.64■□□□□ 0.57
EPHB4-207ENST00000489808 CLN3Q13286 438 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 BRD3Q15059 726 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 RNASEH2BQ5TBB1 312 aaKnown RBP18.64■□□□□ 0.57
EPHB4-207ENST00000489808 IRGCQ6NXR0 463 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 CASC4Q6P4E1 433 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 NAPRTQ6XQN6 538 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 SDCCAG8Q86SQ7 713 aaPredicted RBP18.64■□□□□ 0.57
EPHB4-207ENST00000489808 PMEPA1Q969W9 287 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 CRELD1Q96HD1 420 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 DDA1Q9BW61 102 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 CARD6Q9BX69 1037 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 MVB12BQ9H7P6 319 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 FBXO8Q9NRD0 319 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 HRASLS2Q9NWW9 162 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.64■□□□□ 0.57
EPHB4-207ENST00000489808 RNF14Q9UBS8 474 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 B3GALT1Q9Y5Z6 326 aa18.64■□□□□ 0.57
EPHB4-207ENST00000489808 FAM237BA0A1B0GVD1 139 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 OR5K3A6NET4 321 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 BHMG1C9JSJ3 638 aaPredicted RBP18.63■□□□□ 0.57
EPHB4-207ENST00000489808 KIF1CO43896 1103 aaKnown RBP18.63■□□□□ 0.57
EPHB4-207ENST00000489808 NDUFS3O75489 264 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 CD82P27701 267 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 ACADLP28330 430 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 CCR7P32248 378 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 PAFAH1B1P43034 410 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 MAGEA3P43357 314 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 PTK6Q13882 451 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 ANKRD20A4Q4UJ75 823 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 DCAF12Q5T6F0 453 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 CACHD1Q5VU97 1274 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 BROXQ5VW32 411 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 KIAA0930Q6ICG6 404 aaPredicted RBP18.63■□□□□ 0.57
EPHB4-207ENST00000489808 FAM92BQ6ZTR7 304 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 PRSS42Q7Z5A4 293 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 TMEM135Q86UB9 458 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 PDZD3Q86UT5 571 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 ZFAND4Q86XD8 727 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 KLHL7Q8IXQ5 586 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 ACVR1CQ8NER5 493 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 OR4E2Q8NGC2 313 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 KLHL6Q8WZ60 621 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 SIGLEC10Q96LC7 697 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 FCRL3Q96P31 734 aaPredicted RBP18.63■□□□□ 0.57
EPHB4-207ENST00000489808 ASPSCR1Q9BZE9 553 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 ZNF768Q9H5H4 540 aaKnown RBP18.63■□□□□ 0.57
EPHB4-207ENST00000489808 PRORYQ9H606 182 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 SAMD15Q9P1V8 674 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 SEMA5BQ9P283 1151 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 ASIC3Q9UHC3 531 aa18.63■□□□□ 0.57
EPHB4-207ENST00000489808 OR6C74A6NCV1 312 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 IQCF5A8MTL0 148 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 GOLGA8KD6RF30 607 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 GOLGA8TH3BQL2 631 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 RASSF9O75901 435 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 ITGB6P18564 788 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 PAMP19021 973 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 IVDP26440 423 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 SEPHS1P49903 392 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 RAB15P59190 212 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 PPP1CAP62136 330 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 BOP1Q14137 746 aaKnown RBP18.62■□□□□ 0.57
EPHB4-207ENST00000489808 TGIF1Q15583 401 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 ANKS6Q68DC2 871 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 MRNIPQ6NTE8 343 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 SYDE1Q6ZW31 735 aaPredicted RBP18.62■□□□□ 0.57
EPHB4-207ENST00000489808 PCGF5Q86SE9 256 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 LRRC6Q86X45 466 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 DTX1Q86Y01 620 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 C17orf53Q8N3J3 647 aaPredicted RBP18.62■□□□□ 0.57
EPHB4-207ENST00000489808 RUNDC3BQ96NL0 473 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 TCF12Q99081 682 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 TRIM56Q9BRZ2 755 aaKnown RBP18.62■□□□□ 0.57
EPHB4-207ENST00000489808 TSSK1BQ9BXA7 367 aa18.62■□□□□ 0.57
EPHB4-207ENST00000489808 P2RY12Q9H244 342 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms