RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SLC10A6Q3KNW5 377 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 OR8H1Q8NGG4 311 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 SNX33Q8WV41 574 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 TAMM41Q96BW9 452 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 TRPV5Q9NQA5 729 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 CCDC59Q9P031 241 aaKnown RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 SAGE2PA6NJ88 616 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 ADAMDEC1O15204 470 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 HCN1O60741 890 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 DNAJA2O60884 412 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 LAMP2P13473 410 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 CD247P20963 164 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 FAUP35544 74 aaKnown RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 PBX3P40426 434 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 YBEYP58557 167 aaPredicted RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 LARS2Q15031 903 aaKnown RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 PDE12Q6L8Q7 609 aaKnown RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 PSRC1Q6PGN9 363 aaPredicted RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 ZNF572Q7Z3I7 529 aaPredicted RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 RPL10LQ96L21 214 aaKnown RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 GPN1Q9HCN4 374 aaPredicted RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 XPNPEP1Q9NQW7 623 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 SAP18O00422 153 aaKnown RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 OR1F1O43749 312 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 GLUD1P00367 558 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 DNTTP04053 509 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 RFTN2Q52LD8 501 aaPredicted RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 LAPTM4BQ86VI4 370 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 TMEM192Q8IY95 271 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 TMEM199Q8N511 208 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 FAM83DQ9H4H8 585 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 EIF2B3Q9NR50 452 aaKnown RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 CTPS2Q9NRF8 586 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 SNTG1Q9NSN8 517 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 IGSF9Q9P2J2 1179 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 TMEM233B4DJY2 109 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 ZNF879B4DU55 563 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 NME6O75414 186 aaPredicted RBP17.36■□□□□ 0.37
NPHP4-209ENST00000489180 CCNDBP1O95273 360 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 ACTR3P61158 418 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 SCN1BQ07699 218 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 FRRS1Q6ZNA5 592 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 SLC39A3Q9BRY0 314 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 PPM1HQ9ULR3 514 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 RYKP34925 604 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 GMFBP60983 142 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 PTPRJQ12913 1337 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 MSCO60682 206 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 RAP2AP10114 183 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 ELNP15502 786 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 NDST2P52849 883 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 FRMD7Q6ZUT3 714 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 ATP6V1C2Q8NEY4 427 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 OR13C4Q8NGS5 318 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 SCAMP5Q8TAC9 235 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 OR52B2Q96RD2 323 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 RMI1Q9H9A7 625 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 C1orf109Q9NX04 203 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 TVP23BQ9NYZ1 205 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 SP3Q02447 781 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 OR10H5Q8NGA6 315 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 SLC38A4Q969I6 547 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 ACBD6Q9BR61 282 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 AMBNQ9NP70 447 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 CCDC177Q9NQR7 707 aaPredicted RBP17.36■□□□□ 0.37
NPHP4-209ENST00000489180 ZNF224Q9NZL3 707 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 AKAP7Q9P0M2 348 aaPredicted RBP17.36■□□□□ 0.37
NPHP4-209ENST00000489180 RWDD3Q9Y3V2 267 aa17.36■□□□□ 0.37
NPHP4-209ENST00000489180 H3BNH8 94 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 TBX1O43435 398 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 GADD45GO95257 159 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 FECHP22830 423 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 RPS14P62263 151 aaKnown RBP17.35■□□□□ 0.37
NPHP4-209ENST00000489180 SMARCB1Q12824 385 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 E2F2Q14209 437 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 ALKBH2Q6NS38 261 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 BRSK1Q8TDC3 778 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 UPF1Q92900 1129 aaKnown RBP eCLIP17.35■□□□□ 0.37
NPHP4-209ENST00000489180 KAT8Q9H7Z6 458 aaKnown RBP17.35■□□□□ 0.37
NPHP4-209ENST00000489180 NEK6Q9HC98 313 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 AREL1O15033 823 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 IFNA6P05013 189 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 XRCC1P18887 633 aaPredicted RBP17.35■□□□□ 0.37
NPHP4-209ENST00000489180 CDH15P55291 814 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 MERTKQ12866 999 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 CHST15Q7LFX5 561 aaPredicted RBP17.35■□□□□ 0.37
NPHP4-209ENST00000489180 GPER1Q99527 375 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 TBC1D24Q9ULP9 559 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 PEX16Q9Y5Y5 336 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 RIIAD1A6NNX1 92 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 SIX3O95343 332 aaPredicted RBP17.35■□□□□ 0.37
NPHP4-209ENST00000489180 ASLP04424 464 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 SYPL2Q5VXT5 272 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 ZNF613Q6PF04 617 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 KLHDC10Q6PID8 442 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 MTERF1Q99551 399 aaKnown RBP17.35■□□□□ 0.37
NPHP4-209ENST00000489180 NECTIN3Q9NQS3 549 aa17.35■□□□□ 0.37
NPHP4-209ENST00000489180 INTS10Q9NVR2 710 aaKnown RBP17.35■□□□□ 0.37
NPHP4-209ENST00000489180 OXSMQ9NWU1 459 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms