RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 UBA6A0AVT1 1052 aaPredicted RBP22.41■■□□□ 1.18
COL9A3-213ENST00000489045 GOLGA6L3A6NEY3 463 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 MROH6A6NGR9 719 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 ERI2A8K979 691 aaKnown RBP22.41■■□□□ 1.18
COL9A3-213ENST00000489045 TIAF1O95411 115 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 EBLN1P0CF75 366 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 SFTPCP11686 197 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 ITGB6P18564 788 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 MSNP26038 577 aaKnown RBP22.41■■□□□ 1.18
COL9A3-213ENST00000489045 FDFT1P37268 417 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 ARCN1P48444 511 aaKnown RBP22.41■■□□□ 1.18
COL9A3-213ENST00000489045 ARL4DP49703 201 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 CDH17Q12864 832 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 ARMC6Q6NXE6 501 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 KMT5CQ86Y97 462 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 DNAAF3Q8N9W5 541 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 CATSPER2Q96P56 530 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 OR52A5Q9H2C5 316 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 RARRES3Q9UL19 164 aa22.41■■□□□ 1.18
COL9A3-213ENST00000489045 MRPS18BQ9Y676 258 aaKnown RBP22.41■■□□□ 1.18
COL9A3-213ENST00000489045 OR51F1A6NGY5 319 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 J3QKU1 62 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 ARHGAP6O43182 974 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 F8A1P23610 371 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 PSMA3P25788 255 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 DLSTP36957 453 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 LMAN1P49257 510 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 SNX1Q13596 522 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 RPS6KA1Q15418 735 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 SKIDA1Q1XH10 827 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 MEI1Q5TIA1 1274 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 PPP1R21Q6ZMI0 780 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 PRUNE1Q86TP1 453 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 ACVR1CQ8NER5 493 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 UBE2Q2Q8WVN8 375 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 FERD3LQ96RJ6 166 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 FAM117AQ9C073 453 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 GEMIN8Q9NWZ8 242 aaKnown RBP22.4■■□□□ 1.18
COL9A3-213ENST00000489045 SMARCAL1Q9NZC9 954 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 CROTQ9UKG9 612 aa22.4■■□□□ 1.18
COL9A3-213ENST00000489045 IFRD1O00458 451 aaPredicted RBP22.39■■□□□ 1.17
COL9A3-213ENST00000489045 SLC28A2O43868 658 aa22.39■■□□□ 1.17
COL9A3-213ENST00000489045 SUN1O94901 812 aa22.39■■□□□ 1.17
COL9A3-213ENST00000489045 ETS1P14921 441 aa22.39■■□□□ 1.17
COL9A3-213ENST00000489045 POLR2CP19387 275 aaPredicted RBP22.39■■□□□ 1.17
COL9A3-213ENST00000489045 OAS2P29728 719 aaKnown RBP22.39■■□□□ 1.17
COL9A3-213ENST00000489045 PDHA2P29803 388 aa22.39■■□□□ 1.17
COL9A3-213ENST00000489045 PREPP48147 710 aa22.39■■□□□ 1.17
COL9A3-213ENST00000489045 KPNA2P52292 529 aaKnown RBP22.39■■□□□ 1.17
COL9A3-213ENST00000489045 POLE2P56282 527 aa22.39■■□□□ 1.17
COL9A3-213ENST00000489045 HSD11B2P80365 405 aa22.39■■□□□ 1.17
COL9A3-213ENST00000489045 ACY1Q03154 408 aa22.39■■□□□ 1.17
COL9A3-213ENST00000489045 OR4E2Q8NGC2 313 aa22.39■■□□□ 1.17
COL9A3-213ENST00000489045 PPM1MQ96MI6 270 aa22.39■■□□□ 1.17
COL9A3-213ENST00000489045 FGF21Q9NSA1 209 aa22.39■■□□□ 1.17
COL9A3-213ENST00000489045 HEMK1Q9Y5R4 338 aaPredicted RBP22.39■■□□□ 1.17
COL9A3-213ENST00000489045 HEATR9A2RTY3 570 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 CCDC162PA2VCL2 907 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 E7EVH7 732 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 AP2A2O94973 939 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 GAS8O95995 478 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 TCN2P20062 427 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 FOXN2P32314 431 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 GRIA1P42261 906 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 CCR10P46092 362 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 NFKB2Q00653 900 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 MC1RQ01726 317 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 PRKAA1Q13131 559 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 RPA4Q13156 261 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 SEMA5AQ13591 1074 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 ITIH4Q14624 930 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 ATP1A1-AS1Q5TC04 95 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 PWWP2BQ6NUJ5 590 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 C16orf46Q6P387 395 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 ZNF449Q6P9G9 518 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 FBXO38Q6PIJ6 1188 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 PRICKLE2Q7Z3G6 844 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 D2HGDHQ8N465 521 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 OR13J1Q8NGT2 312 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 LCN9Q8WX39 176 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 ADNPQ9H2P0 1102 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 SRMSQ9H3Y6 488 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 LZTFL1Q9NQ48 299 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 RAB6BQ9NRW1 208 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 PRSS21Q9Y6M0 314 aa22.38■■□□□ 1.17
COL9A3-213ENST00000489045 TERTO14746 1132 aaKnown RBP22.37■■□□□ 1.17
COL9A3-213ENST00000489045 ZIC2O95409 532 aaPredicted RBP22.37■■□□□ 1.17
COL9A3-213ENST00000489045 ZBTB11O95625 1053 aaPredicted RBP22.37■■□□□ 1.17
COL9A3-213ENST00000489045 MT-ND3P03897 115 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 GSTM1P09488 218 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 CCNYL3P0C7X3 344 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 NSG1P42857 185 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 CD151P48509 253 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 GSTM4Q03013 218 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 KCNAB2Q13303 367 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 SIX1Q15475 284 aaPredicted RBP22.37■■□□□ 1.17
COL9A3-213ENST00000489045 GPR19Q15760 415 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 PACS1Q6VY07 963 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 CARFQ8N187 725 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 CCDC89Q8N998 374 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms