RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 GCSAMQ8N6F7 178 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 CNBD1Q8NA66 436 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 BBS10Q8TAM1 723 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 SPATA20Q8TB22 786 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 USP6NLQ92738 828 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 SCRN2Q96FV2 425 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 MAK16Q9BXY0 300 aaKnown RBP4.18□□□□□ -1.74
ITGB1-214ENST00000488427 MMP28Q9H239 520 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 LRMDAQ9H2I8 198 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 TCP11L1Q9NUJ3 509 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 OGFRQ9NZT2 677 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 RALYQ9UKM9 306 aaKnown RBP4.18□□□□□ -1.74
ITGB1-214ENST00000488427 NENFQ9UMX5 172 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 TCF19Q9Y242 345 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 CLIC4Q9Y696 253 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 FER1L6Q2WGJ9 1857 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 ZCWPW2A0A1B0GU75 182 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 AP3D1O14617 1153 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 SYNGR3O43761 229 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 LMX1BO60663 402 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 USO1O60763 962 aaKnown RBP4.17□□□□□ -1.74
ITGB1-214ENST00000488427 TSPAN9O75954 239 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 ITGA2P17301 1181 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 HMGB2P26583 209 aaKnown RBP4.17□□□□□ -1.74
ITGB1-214ENST00000488427 APOBEC1P41238 236 aaKnown RBP4.17□□□□□ -1.74
ITGB1-214ENST00000488427 CAMPP49913 170 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 GPR143P51810 404 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 FUT6P51993 359 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 CDH8P55286 799 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 GEMIN4P57678 1058 aaKnown RBP4.17□□□□□ -1.74
ITGB1-214ENST00000488427 HYAL1Q12794 435 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 ILF3Q12906 894 aaKnown RBP eCLIP4.17□□□□□ -1.74
ITGB1-214ENST00000488427 CDC16Q13042 620 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 CCDC6Q16204 474 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 PKN2Q16513 984 aaKnown RBP4.17□□□□□ -1.74
ITGB1-214ENST00000488427 CCDC96Q2M329 555 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 STPG1Q5TH74 334 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 HIST2H2BCQ6DN03 193 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 HIST2H2BDQ6DRA6 164 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 Q6ZTC4 211 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 TPRG1Q6ZUI0 275 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 SMIM5Q71RC9 77 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 SLC9B2Q86UD5 537 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 TSPAN33Q86UF1 283 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 NRROSQ86YC3 692 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 ADGRF2Q8IZF7 708 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 PHF21AQ96BD5 680 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 PERPQ96FX8 193 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 PPP1R13BQ96KQ4 1090 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 ZNF583Q96ND8 569 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 SPRY4Q9C004 299 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 PIGMQ9H3S5 423 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 UPF2Q9HAU5 1272 aaKnown RBP4.17□□□□□ -1.74
ITGB1-214ENST00000488427 ZNF334Q9HCZ1 680 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-214ENST00000488427 STK26Q9P289 416 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 OR2W1Q9Y3N9 320 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 TMEM184BQ9Y519 407 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-214ENST00000488427 MYOM3Q5VTT5 1437 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 NSD3Q9BZ95 1437 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 LAMA3Q16787 3333 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 BDP1A6H8Y1 2624 aa4.17□□□□□ -1.74
ITGB1-214ENST00000488427 ATRXP46100 2492 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 CACNA1SQ13698 1873 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 MUC3AQ02505 3323 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 PPIP5K1Q6PFW1 1433 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 OR5K3A6NET4 321 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 CDRT15L2A8MXV6 281 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 H3BQ06 376 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-214ENST00000488427 IFNL4K9M1U5 179 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 P2RY10O00398 339 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 ZBTB43O43298 467 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 ICAM1P05362 532 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 RB1P06400 928 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 MMP10P09238 476 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 HLA-DOBP13765 273 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 CSF2RAP15509 400 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 ANXA7P20073 488 aaKnown RBP4.16□□□□□ -1.74
ITGB1-214ENST00000488427 PSMB10P40306 273 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 MSH2P43246 934 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 CLCN3P51790 818 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 CLDN20P56880 219 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 GAGE2BQ13066 116 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 IKQ13123 557 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-214ENST00000488427 MVPQ14764 893 aaKnown RBP4.16□□□□□ -1.74
ITGB1-214ENST00000488427 GAGE2EQ4V326 116 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 KRTCAP3Q53RY4 240 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 RARS2Q5T160 578 aaKnown RBP4.16□□□□□ -1.74
ITGB1-214ENST00000488427 PMS2CLQ68D20 193 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 LCN10Q6JVE6 187 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 ZNF280DQ6N043 979 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 GAGE2AQ6NT46 116 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 PACS1Q6VY07 963 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 OR5R1Q8NH85 324 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 DACH2Q96NX9 599 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 WDFY2Q96P53 400 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 POLR3CQ9BUI4 534 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-214ENST00000488427 UBA5Q9GZZ9 404 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 MARCH4Q9P2E8 410 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-214ENST00000488427 GAGE2DQ9UEU5 116 aa4.16□□□□□ -1.74
ITGB1-214ENST00000488427 CMAHPQ9Y471 501 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms