RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 HM13Q8TCT9 377 aa11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 UBXN4Q92575 508 aa11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 CDKN2AIPNLQ96HQ2 116 aa11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 LINC00615Q96LM1 132 aaPredicted RBP11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 PPP1R2P1Q96PQ5 205 aa11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 ALS2CR12Q96Q35 445 aa11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 RAB33BQ9H082 229 aa11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 LRRC40Q9H9A6 602 aa11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 AKIRIN1Q9H9L7 192 aaPredicted RBP11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 ARNT2Q9HBZ2 717 aa11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 PDE7BQ9NP56 450 aa11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 ZDHHC3Q9NYG2 299 aa11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 GUCA1BQ9UMX6 200 aa11.02□□□□□ -0.65
NIPAL3-207ENST00000488155 GSAPA4D1B5 854 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 TLCD2A6NGC4 264 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 AGAP14A8MT82 685 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 IFNB1P01574 187 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 FURINP09958 794 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 SFTPCP11686 197 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 ETS1P14921 441 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 ACRV1P26436 265 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 LMAN1P49257 510 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 KPNA2P52292 529 aaKnown RBP11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 PRKG2Q13237 762 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 KCNAB2Q13303 367 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 SNX1Q13596 522 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 MAP7Q14244 749 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 BRD3Q15059 726 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 SEL1L2Q5TEA6 688 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 CAPRIN2Q6IMN6 1127 aaKnown RBP11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 FAM199XQ6PEV8 388 aaPredicted RBP11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 NAPRTQ6XQN6 538 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 TMEM135Q86UB9 458 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 PIANPQ8IYJ0 282 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 TXLNBQ8N3L3 684 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 STYXQ8WUJ0 223 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 C1orf54Q8WWF1 131 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 HES6Q96HZ4 224 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 SLC41A2Q96JW4 573 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 CATSPER2Q96P56 530 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 RUFY1Q96T51 708 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 CCM2Q9BSQ5 444 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 KLHL25Q9H0H3 589 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 KIR3DX1Q9H7L2 352 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 COG4Q9H9E3 785 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 FGF21Q9NSA1 209 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 NLE1Q9NVX2 485 aaPredicted RBP11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 SOHLH2Q9NX45 425 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 SMARCAL1Q9NZC9 954 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 IMPACTQ9P2X3 320 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 FEZ2Q9UHY8 353 aaPredicted RBP11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 PADI1Q9ULC6 663 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 PCDHB3Q9Y5E6 796 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 PRSS21Q9Y6M0 314 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 COLEC10Q9Y6Z7 277 aa11.01□□□□□ -0.65
NIPAL3-207ENST00000488155 CDC14CA4D256 554 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 SLC9B1P1A6NJY1 282 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 PSMD3O43242 534 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 SUV39H1O43463 412 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 AP2A1O95782 977 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 ATXN8OSP0DMR3 200 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 CDH3P22223 829 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 GRIA1P42261 906 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 MC1RQ01726 317 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 ACY1Q03154 408 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 CACNG1Q06432 222 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 PRKAA1Q13131 559 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 DNASE1L3Q13609 305 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 DBN1Q16643 649 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 KCTD19Q17RG1 926 aaPredicted RBP11□□□□□ -0.65
NIPAL3-207ENST00000488155 SKIDA1Q1XH10 827 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 P3H1Q32P28 736 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 GPR33Q49SQ1 333 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 LARP7Q4G0J3 582 aaKnown RBP eCLIP11□□□□□ -0.65
NIPAL3-207ENST00000488155 PRAMEF17Q5VTA0 474 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 ATG14Q6ZNE5 492 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 KLHDC8BQ8IXV7 354 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 DNAAF3Q8N9W5 541 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 CT55Q8WUE5 264 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 HEXDCQ8WVB3 486 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 LCN9Q8WX39 176 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 HGH1Q9BTY7 390 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 TLR10Q9BXR5 811 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 ADNPQ9H2P0 1102 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 XKR8Q9H6D3 395 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 ETNK1Q9HBU6 452 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 LHX9Q9NQ69 397 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 SEMA5BQ9P283 1151 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 ZNF148Q9UQR1 794 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 SCN2AQ99250 2005 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 TENM4Q6N022 2769 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 ESPL1Q14674 2120 aa11□□□□□ -0.65
NIPAL3-207ENST00000488155 TRBV5-4A0A0C4DH59 114 aa10.99□□□□□ -0.65
NIPAL3-207ENST00000488155 C17orf113A0A1B0GUU1 675 aa10.99□□□□□ -0.65
NIPAL3-207ENST00000488155 PIPSLA2A3N6 862 aa10.99□□□□□ -0.65
NIPAL3-207ENST00000488155 CCDC162PA2VCL2 907 aa10.99□□□□□ -0.65
NIPAL3-207ENST00000488155 IFRD1O00458 451 aaPredicted RBP10.99□□□□□ -0.65
NIPAL3-207ENST00000488155 BTN3A3O00478 584 aa10.99□□□□□ -0.65
NIPAL3-207ENST00000488155 BTN3A1O00481 513 aa10.99□□□□□ -0.65
NIPAL3-207ENST00000488155 ZNF189O75820 626 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms