RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 RABGEF1Q9UJ41 708 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 CFAP20Q9Y6A4 193 aaKnown RBP23.12■■□□□ 1.29
ABCF3-216ENST00000485921 V9GYY5 206 aaPredicted RBP23.12■■□□□ 1.29
ABCF3-216ENST00000485921 IFRD1O00458 451 aaPredicted RBP23.11■■□□□ 1.29
ABCF3-216ENST00000485921 GPC4O75487 556 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 DKK1O94907 266 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 MYBL2P10244 700 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 MTHFD1P11586 935 aaKnown RBP23.11■■□□□ 1.29
ABCF3-216ENST00000485921 PHBP35232 272 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 E2F1Q01094 437 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 KBTBD12Q3ZCT8 623 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 ZNF438Q7Z4V0 828 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 CTAGE3PQ8IX95 158 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 Q8N9G6 341 aaPredicted RBP23.11■■□□□ 1.29
ABCF3-216ENST00000485921 KCNJ9Q92806 393 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 SH3KBP1Q96B97 665 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 LATS2Q9NRM7 1088 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 CDYLQ9Y232 598 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 DCHS1Q96JQ0 3298 aa23.11■■□□□ 1.29
ABCF3-216ENST00000485921 PRAMEF33A0A0G2JMD5 474 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 SLCO2B1O94956 709 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 ACSL3O95573 720 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 CDK4P11802 303 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 PLEKHS1Q5SXH7 462 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 RBM20Q5T481 1227 aaKnown RBP23.1■■□□□ 1.29
ABCF3-216ENST00000485921 UBAP2Q5T6F2 1119 aaKnown RBP23.1■■□□□ 1.29
ABCF3-216ENST00000485921 CCNI2Q6ZMN8 369 aaPredicted RBP23.1■■□□□ 1.29
ABCF3-216ENST00000485921 PDZD3Q86UT5 571 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 ZNF761Q86XN6 746 aaPredicted RBP23.1■■□□□ 1.29
ABCF3-216ENST00000485921 VRK3Q8IV63 474 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 SLC22A15Q8IZD6 547 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 ZBTB2Q8N680 514 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 PPM1NQ8N819 430 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 SLC38A3Q99624 504 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 POT1Q9NUX5 634 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 TXNDC16Q9P2K2 825 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 CORO1CQ9ULV4 474 aaPredicted RBP23.1■■□□□ 1.29
ABCF3-216ENST00000485921 MED16Q9Y2X0 877 aa23.1■■□□□ 1.29
ABCF3-216ENST00000485921 ASXL3Q9C0F0 2248 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 VPS26AO75436 327 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 ALDH4A1P30038 563 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 GPR3P46089 330 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 CLCN7P51798 805 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 NR1D2Q14995 579 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 N4BP2L1Q5TBK1 243 aaPredicted RBP23.09■■□□□ 1.29
ABCF3-216ENST00000485921 DUS1LQ6P1R4 473 aaKnown RBP23.09■■□□□ 1.29
ABCF3-216ENST00000485921 DHRS13Q6UX07 377 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 ZC3HC1Q86WB0 502 aaKnown RBP23.09■■□□□ 1.29
ABCF3-216ENST00000485921 GPATCH11Q8N954 259 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 SIDT2Q8NBJ9 832 aaKnown RBP23.09■■□□□ 1.29
ABCF3-216ENST00000485921 ATXN7L3BQ96GX2 97 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 GPR21Q99679 349 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 CPNE1Q99829 537 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 ABCG4Q9H172 646 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 SLC40A1Q9NP59 571 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 HEBP2Q9Y5Z4 205 aa23.09■■□□□ 1.29
ABCF3-216ENST00000485921 B4GAT1O43505 415 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 OPA1O60313 960 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 ACADLP28330 430 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 CDKN2DP55273 166 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 OR1D5P58170 312 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 CCL7P80098 99 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 KRT33BQ14525 404 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 ERCC6LQ2NKX8 1250 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 HECTD2Q5U5R9 776 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 TRMT10CQ7L0Y3 403 aaKnown RBP23.08■■□□□ 1.29
ABCF3-216ENST00000485921 SPRED1Q7Z699 444 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 RBM12BQ8IXT5 1001 aaKnown RBP23.08■■□□□ 1.29
ABCF3-216ENST00000485921 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.08■■□□□ 1.29
ABCF3-216ENST00000485921 TFGQ92734 400 aaPredicted RBP23.08■■□□□ 1.29
ABCF3-216ENST00000485921 INPP5DQ92835 1189 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 FERD3LQ96RJ6 166 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 SLC30A3Q99726 388 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.08■■□□□ 1.29
ABCF3-216ENST00000485921 RHOJQ9H4E5 214 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 KCNK4Q9NYG8 393 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 TAS2R13Q9NYV9 303 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 KLHL42Q9P2K6 505 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 DHRS7Q9Y394 339 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 COLEC10Q9Y6Z7 277 aa23.08■■□□□ 1.29
ABCF3-216ENST00000485921 RP1P56715 2156 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 CASC3O15234 703 aaKnown RBP23.07■■□□□ 1.28
ABCF3-216ENST00000485921 ZW10O43264 779 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 GP5P40197 560 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 PMS2P54278 862 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 VSNL1P62760 191 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 TIAL1Q01085 375 aaKnown RBP eCLIP23.07■■□□□ 1.28
ABCF3-216ENST00000485921 NAB1Q13506 487 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 EFTUD2Q15029 972 aaKnown RBP eCLIP23.07■■□□□ 1.281e-14■■■■■ 99.4
ABCF3-216ENST00000485921 FAM45BPQ6NSW5 357 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 TMEM26Q6ZUK4 368 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 PHC3Q8NDX5 983 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 GIMAP7Q8NHV1 300 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 FAM45AQ8TCE6 357 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 ADAMTS14Q8WXS8 1223 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 CYTH2Q99418 400 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 MCMBPQ9BTE3 642 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 FUT8Q9BYC5 575 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 TXLNGYQ9BZA5 131 aa23.07■■□□□ 1.28
ABCF3-216ENST00000485921 LRRN3Q9H3W5 708 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms