RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 CPNE1Q99829 537 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 THTPAQ9BU02 230 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 NMUR2Q9GZQ4 415 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 SENP6Q9GZR1 1112 aaPredicted RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 TDRD3Q9H7E2 651 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 PLEKHA5Q9HAU0 1116 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 APOBEC3GQ9HC16 384 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 TRPC7Q9HCX4 862 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 ZNF302Q9NR11 478 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 DNAJC17Q9NVM6 304 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 CHCHD3Q9NX63 227 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 TUBA8Q9NY65 449 aaPredicted RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 UTP6Q9NYH9 597 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 MOCS1Q9NZB8 636 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 SLC17A7Q9P2U7 560 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 TESQ9UGI8 421 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 SLC7A8Q9UHI5 535 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 PTBP2Q9UKA9 531 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 DERAQ9Y315 318 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 SCN4AP35499 1836 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 A0A1W2PRQ8 180 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 RGSL1A5PLK6 1076 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 ARHGAP42A6NI28 874 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 TRPC5OSA6NMA1 111 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 CXorf49A8MYA2 514 aaPredicted RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 FOXO6A8MYZ6 492 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 PI4K2BG5E9Z4 385 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 BUD23O43709 281 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 TMEM63AO94886 807 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 BAG2O95816 211 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 CLPTM1O96005 669 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 AMY1AP04745 511 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 ENO1P06733 434 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 ZSCAN5DPP0CG00 497 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 MCF2P10911 925 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 RPS12P25398 132 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 MIPP30301 263 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 RFC1P35251 1148 aaPredicted RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 SPRP35270 261 aaPredicted RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 GJC1P36383 396 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 CPOXP36551 454 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 GP5P40197 560 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 RAD52P43351 418 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 PTPN9P43378 593 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 ACADSBP45954 432 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 PSMD8P48556 350 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 SLC1A6P48664 564 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 NUMBP49757 651 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 CSE1LP55060 971 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 MTTPP55157 894 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 SOX8P57073 446 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 NUP107P57740 925 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 SNAP25P60880 206 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 RPL7AP62424 266 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 YWHAZP63104 245 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 ZNF33AQ06730 810 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 INCA1Q0VD86 236 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 TRAP1Q12931 704 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 TMED1Q13445 227 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 FASTKD3Q14CZ7 662 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 PDK3Q15120 406 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 STXBP2Q15833 593 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 UGP2Q16851 508 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 FAM187BQ17R55 369 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 CNPY1Q3B7I2 92 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 SPANXN3Q5MJ09 141 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 RABGAP1LQ5R372 815 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 UBAP2Q5T6F2 1119 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 LMBRD2Q68DH5 695 aaPredicted RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 LRRC8BQ6P9F7 803 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 RFWD3Q6PCD5 774 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 LCLAT1Q6UWP7 414 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 SEPT14Q6ZU15 432 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 PLPPR4Q7Z2D5 763 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 PRUNE1Q86TP1 453 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 KBTBD6Q86V97 674 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 UNC93AQ86WB7 457 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 CTAGE3PQ8IX95 158 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 NDUFAF2Q8N183 169 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 PQLC1Q8N2U9 271 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 CPSF7Q8N684 471 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 FAM71DQ8N9W8 422 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 B4GALNT2Q8NHY0 566 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 HM13Q8TCT9 377 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 ACER1Q8TDN7 264 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 DEPDC1BQ8WUY9 529 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 WDR60Q8WVS4 1066 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 HTRA1Q92743 480 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 CCDC126Q96EE4 140 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 DUS3LQ96G46 650 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 SERAC1Q96JX3 654 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 MAELQ96JY0 434 aaKnown RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 QKIQ96PU8 341 aaKnown RBP eCLIP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 PANX3Q96QZ0 392 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 NELL2Q99435 816 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 VAT1Q99536 393 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 NDNQ99608 321 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 TREX2Q9BQ50 279 aaPredicted RBP4.77□□□□□ -1.65
SSBP1-211ENST00000484178 CHCHD6Q9BRQ6 235 aa4.77□□□□□ -1.65
SSBP1-211ENST00000484178 ADPGKQ9BRR6 497 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms