RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 HLA-DOBP13765 273 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 NR2F2P24468 414 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 USP8P40818 1118 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 NOVP48745 357 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 SNRPEP62304 92 aaKnown RBP3.14□□□□□ -1.91
CLOCK-204ENST00000479384 UBXN2AP68543 259 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 PLIN5Q00G26 463 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 RELQ04864 619 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-204ENST00000479384 ZNF234Q14588 700 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 C9orf152Q5JTZ5 239 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 IRAK1BP1Q5VVH5 260 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 ALS2CLQ60I27 953 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 ARHGAP17Q68EM7 881 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 ADALQ6DHV7 355 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 GFRALQ6UXV0 394 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 ZNF497Q6ZNH5 498 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 ZNF534Q76KX8 674 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 ATG9AQ7Z3C6 839 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 C1orf87Q8N0U7 546 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 FBXO39Q8N4B4 442 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 C1orf52Q8N6N3 182 aaKnown RBP3.14□□□□□ -1.91
CLOCK-204ENST00000479384 LPGAT1Q92604 370 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 ALG14Q96F25 216 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 CNDP2Q96KP4 475 aaKnown RBP3.14□□□□□ -1.91
CLOCK-204ENST00000479384 DGAT2Q96PD7 388 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 SEMA6AQ9H2E6 1030 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 PPIL3Q9H2H8 161 aaKnown RBP3.14□□□□□ -1.91
CLOCK-204ENST00000479384 BCCIPQ9P287 314 aaKnown RBP eCLIP3.14□□□□□ -1.91
CLOCK-204ENST00000479384 NFKBIL1Q9UBC1 381 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-204ENST00000479384 CFDP1Q9UEE9 299 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-204ENST00000479384 POU2F3Q9UKI9 436 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 OR2W1Q9Y3N9 320 aa3.14□□□□□ -1.91
CLOCK-204ENST00000479384 A0A1W2PP11 408 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 ASPDHA6ND91 283 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 OR5K3A6NET4 321 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 TMEM178BH3BS89 294 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 CAPN9O14815 690 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 ZNHIT1O43257 154 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 PRAMEF11O60813 436 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 BMP10O95393 424 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 FAM106CPP0CH98 169 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 ITGA2P17301 1181 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 IL15P40933 162 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-204ENST00000479384 EEF1A1P68104 462 aaKnown RBP3.13□□□□□ -1.91
CLOCK-204ENST00000479384 GAGE2BQ13066 116 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 SNTB1Q13884 538 aaKnown RBP3.13□□□□□ -1.91
CLOCK-204ENST00000479384 GTF2H2Q13888 395 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 SLC1A5Q15758 541 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 SNAPC1Q16533 368 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 GAGE2EQ4V326 116 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 ERMARDQ5T6L9 678 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 EEF1A1P5Q5VTE0 462 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 TMEM211Q6ICI0 200 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 GAGE2AQ6NT46 116 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 RPUSD3Q6P087 351 aaKnown RBP3.13□□□□□ -1.91
CLOCK-204ENST00000479384 GTF2H2CQ6P1K8 395 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 RAD9BQ6WBX8 426 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 ZNF704Q6ZNC4 412 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-204ENST00000479384 PLEKHM3Q6ZWE6 761 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 TMEM219Q86XT9 240 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 KMT5CQ86Y97 462 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 AFAP1Q8N556 730 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 MAPK1IP1LQ8NDC0 245 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 SLC24A4Q8NFF2 622 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 BBS10Q8TAM1 723 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 WDR20Q8TBZ3 569 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 BAG1Q99933 345 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-204ENST00000479384 SYT17Q9BSW7 474 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 MOV10L1Q9BXT6 1211 aaKnown RBP3.13□□□□□ -1.91
CLOCK-204ENST00000479384 CSTL1Q9H114 145 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 RABEP2Q9H5N1 569 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 TCP11L1Q9NUJ3 509 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 GDE1Q9NZC3 331 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 KLHL9Q9P2J3 617 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 GAGE2DQ9UEU5 116 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 ANAPC2Q9UJX6 822 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 RPS6KL1Q9Y6S9 549 aa3.13□□□□□ -1.91
CLOCK-204ENST00000479384 ZCWPW2A0A1B0GU75 182 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 TCRBV21S2A2A0A5A6 115 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 OR2M5A3KFT3 312 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 C15orf62A8K5M9 175 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 PMS2P5A8MQ11 134 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 ANKRD66B4E2M5 251 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 BUD23O43709 281 aaKnown RBP3.12□□□□□ -1.91
CLOCK-204ENST00000479384 SSX4O60224 188 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 DKC1O60832 514 aaKnown RBP eCLIP3.12□□□□□ -1.91
CLOCK-204ENST00000479384 WDR1O75083 606 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 CREG1O75629 220 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 PSMD10O75832 226 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 APOA4P06727 396 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 PRSS1P07477 247 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 DNASE1P24855 282 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 EEF1DP29692 281 aaKnown RBP3.12□□□□□ -1.91
CLOCK-204ENST00000479384 FMO5P49326 533 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 PITX1P78337 314 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-204ENST00000479384 PLA2G7Q13093 441 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 PPIGQ13427 754 aaKnown RBP eCLIP3.12□□□□□ -1.91
CLOCK-204ENST00000479384 ALCAMQ13740 583 aa3.12□□□□□ -1.91
CLOCK-204ENST00000479384 IL11RAQ14626 422 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms