RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 SLC24A2Q9UI40 661 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 PCDHGA7Q9Y5G6 932 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 CFAP47Q6ZTR5 3102 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 FAM237BA0A1B0GVD1 139 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 SLC5A10A0PJK1 596 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 MAGEB16A2A368 324 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 EFCAB7A8K855 629 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 IQCF5A8MTL0 148 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 C9orf172C9J069 976 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 CCDC188H7C350 402 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 IFRD1O00458 451 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-206ENST00000478214 PRMT5O14744 637 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-206ENST00000478214 NVLO15381 856 aaKnown RBP15.2■□□□□ 0.02
HMGA1-206ENST00000478214 PRAMEF10O60809 474 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 NDUFS3O75489 264 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 CASQ1P31415 396 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 CD151P48509 253 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 PPP1CAP62136 330 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 DR1Q01658 176 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 BOP1Q14137 746 aaKnown RBP15.2■□□□□ 0.02
HMGA1-206ENST00000478214 IZUMO3Q5VZ72 239 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 IRGCQ6NXR0 463 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 SYT10Q6XYQ8 523 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 LRRC69Q6ZNQ3 347 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 PDZD3Q86UT5 571 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 FAM129CQ86XR2 697 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 PHC3Q8NDX5 983 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 LKAAEAR1Q8TD35 194 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 ZFPM2Q8WW38 1151 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 PMEPA1Q969W9 287 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 SIGLEC10Q96LC7 697 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 RUNDC3BQ96NL0 473 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 FERD3LQ96RJ6 166 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 TRIM51Q9BSJ1 452 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 IL1RAPL1Q9NZN1 696 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 FOXJ2Q9P0K8 574 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 EPHA6Q9UF33 1036 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 HEBP2Q9Y5Z4 205 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 MAD1L1Q9Y6D9 718 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 RPS6KL1Q9Y6S9 549 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 COLEC10Q9Y6Z7 277 aa15.2■□□□□ 0.02
HMGA1-206ENST00000478214 AHCTF1Q8WYP5 2266 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 BHMG1C9JSJ3 638 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-206ENST00000478214 F8W8V4 182 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 TTI1O43156 1089 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 KIF1CO43896 1103 aaKnown RBP15.19■□□□□ 0.02
HMGA1-206ENST00000478214 PAMP19021 973 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 NDUFS1P28331 727 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 CCR7P32248 378 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 CSE1LP55060 971 aaKnown RBP15.19■□□□□ 0.02
HMGA1-206ENST00000478214 DHX34Q14147 1143 aaKnown RBP15.19■□□□□ 0.02
HMGA1-206ENST00000478214 COL28A1Q2UY09 1125 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 SYTL3Q4VX76 610 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 PTRHD1Q6GMV3 140 aaKnown RBP15.19■□□□□ 0.02
HMGA1-206ENST00000478214 MRNIPQ6NTE8 343 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 NEPROQ6NW34 567 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 FAM92BQ6ZTR7 304 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 SYDE1Q6ZW31 735 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-206ENST00000478214 SDCCAG8Q86SQ7 713 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-206ENST00000478214 TMEM135Q86UB9 458 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 SPACA3Q8IXA5 215 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 KRT222Q8N1A0 295 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 BMPERQ8N8U9 685 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 KCNE4Q8WWG9 221 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 TFGQ92734 400 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-206ENST00000478214 ART4Q93070 314 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 ZDHHC12Q96GR4 267 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 KRT12Q99456 494 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 NRTNQ99748 197 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 CARD6Q9BX69 1037 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 P2RY12Q9H244 342 aa15.19■□□□□ 0.02
HMGA1-206ENST00000478214 ZCWPW2A0A1B0GU75 182 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 UBA6A0AVT1 1052 aaPredicted RBP15.18■□□□□ 0.02
HMGA1-206ENST00000478214 OR6C74A6NCV1 312 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 OR5K3A6NET4 321 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 B4E171 279 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 BANF1O75531 89 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 RASSF9O75901 435 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 ANKRD34CP0C6C1 535 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 ACADLP28330 430 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 TSPAN7P41732 249 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 ABCG1P45844 678 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 SEPHS1P49903 392 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 MRPS25P82663 173 aaKnown RBP15.18■□□□□ 0.02
HMGA1-206ENST00000478214 PLOD1Q02809 727 aaPredicted RBP15.18■□□□□ 0.02
HMGA1-206ENST00000478214 TLE3Q04726 772 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 PRKG2Q13237 762 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 TYSND1Q2T9J0 566 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 KLHL35Q6PF15 583 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 PCGF5Q86SE9 256 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 HOOK3Q86VS8 718 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 ACVR1CQ8NER5 493 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 OR4E2Q8NGC2 313 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 LPGAT1Q92604 370 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 STAMBPL1Q96FJ0 436 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 CRELD1Q96HD1 420 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 TAAR9Q96RI9 348 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 HGH1Q9BTY7 390 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 RAB33BQ9H082 229 aa15.18■□□□□ 0.02
HMGA1-206ENST00000478214 MVB12BQ9H7P6 319 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms