RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 CCDC74BQ96LY2 380 aa15.84■□□□□ 0.13
SRM-204ENST00000475189 BIRC8Q96P09 236 aa15.84■□□□□ 0.13
SRM-204ENST00000475189 WDR83Q9BRX9 315 aaKnown RBP15.84■□□□□ 0.13
SRM-204ENST00000475189 NAT9Q9BTE0 207 aa15.84■□□□□ 0.13
SRM-204ENST00000475189 DPH5Q9H2P9 285 aa15.84■□□□□ 0.13
SRM-204ENST00000475189 C20orf96Q9NUD7 363 aaPredicted RBP15.84■□□□□ 0.13
SRM-204ENST00000475189 PDP2Q9P2J9 529 aa15.84■□□□□ 0.13
SRM-204ENST00000475189 GNPTGQ9UJJ9 305 aa15.84■□□□□ 0.13
SRM-204ENST00000475189 HEBP2Q9Y5Z4 205 aa15.84■□□□□ 0.13
SRM-204ENST00000475189 WDFY3Q8IZQ1 3526 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 IFRD1O00458 451 aaPredicted RBP15.83■□□□□ 0.12
SRM-204ENST00000475189 NDC80O14777 642 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 PFDN6O15212 129 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 TTC4O95801 387 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 S1PR4O95977 384 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 THRAP10827 490 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 AMD1P17707 334 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 AOAHP28039 575 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 ELK3P41970 407 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 EIF3BP55884 814 aaKnown RBP15.83■□□□□ 0.12
SRM-204ENST00000475189 ARL4CP56559 192 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 PLOD1Q02809 727 aaPredicted RBP15.83■□□□□ 0.12
SRM-204ENST00000475189 TRA2AQ13595 282 aaKnown RBP eCLIP15.83■□□□□ 0.12
SRM-204ENST00000475189 BOP1Q14137 746 aaKnown RBP15.83■□□□□ 0.12
SRM-204ENST00000475189 C16orf72Q14CZ0 275 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 HIF1AQ16665 826 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 SYTL3Q4VX76 610 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 CTSL3PQ5NE16 218 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 HP1BP3Q5SSJ5 553 aaPredicted RBP15.83■□□□□ 0.12
SRM-204ENST00000475189 RNF187Q5TA31 235 aaPredicted RBP15.83■□□□□ 0.12
SRM-204ENST00000475189 ZNF470Q6ECI4 717 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 PTRHD1Q6GMV3 140 aaKnown RBP15.83■□□□□ 0.12
SRM-204ENST00000475189 RAB11FIP2Q7L804 512 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 PDZD3Q86UT5 571 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 UNC5BQ8IZJ1 945 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 BBOF1Q8ND07 529 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 RCBTB1Q8NDN9 531 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 PHC3Q8NDX5 983 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 JPH3Q8WXH2 748 aaPredicted RBP15.83■□□□□ 0.12
SRM-204ENST00000475189 LRRC39Q96DD0 335 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 TSSK1BQ9BXA7 367 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 KIR3DX1Q9H7L2 352 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 PLAC1Q9HBJ0 212 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 WHRNQ9P202 907 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 SLC24A2Q9UI40 661 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 CHMP2BQ9UQN3 213 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 PCDHGA8Q9Y5G5 932 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 MRFAP1Q9Y605 127 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 TEX264Q9Y6I9 313 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 COLEC10Q9Y6Z7 277 aa15.83■□□□□ 0.12
SRM-204ENST00000475189 URB1O60287 2271 aaKnown RBP15.83■□□□□ 0.12
SRM-204ENST00000475189 BHMG1C9JSJ3 638 aaPredicted RBP15.82■□□□□ 0.12
SRM-204ENST00000475189 AGRPO00253 132 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 TAF4O00268 1085 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 GPC4O75487 556 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 DXOO77932 396 aaKnown RBP15.82■□□□□ 0.12
SRM-204ENST00000475189 F7P08709 466 aaPredicted RBP15.82■□□□□ 0.12
SRM-204ENST00000475189 ACADLP28330 430 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 NDUFS1P28331 727 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 FMO4P31512 558 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 CSE1LP55060 971 aaKnown RBP15.82■□□□□ 0.12
SRM-204ENST00000475189 ADARP55265 1226 aaKnown RBP15.82■□□□□ 0.12
SRM-204ENST00000475189 CBLBQ13191 982 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 EIF3IQ13347 325 aaKnown RBP15.82■□□□□ 0.12
SRM-204ENST00000475189 CTBP1Q13363 440 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 HSP90AA5PQ58FG0 334 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 SPANXN3Q5MJ09 141 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 FOXR1Q6PIV2 292 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 IGF2-ASQ6U949 168 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 KCNMB4Q86W47 210 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 DENND6AQ8IWF6 608 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 LMNTD2Q8IXW0 634 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 FBXO39Q8N4B4 442 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 CALML6Q8TD86 181 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 RSC1A1Q92681 617 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 TFGQ92734 400 aaPredicted RBP15.82■□□□□ 0.12
SRM-204ENST00000475189 TMEM159Q96B96 161 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 PANX3Q96QZ0 392 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 FERD3LQ96RJ6 166 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 ZMYND15Q9H091 742 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 INTS10Q9NVR2 710 aaKnown RBP15.82■□□□□ 0.12
SRM-204ENST00000475189 GRHL1Q9NZI5 618 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 CDYLQ9Y232 598 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 CRYL1Q9Y2S2 319 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 LOXL2Q9Y4K0 774 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 USP24Q9UPU5 2620 aa15.82■□□□□ 0.12
SRM-204ENST00000475189 E7ESA3 106 aa15.81■□□□□ 0.12
SRM-204ENST00000475189 PLD2O14939 933 aa15.81■□□□□ 0.12
SRM-204ENST00000475189 HGSO14964 777 aaPredicted RBP15.81■□□□□ 0.12
SRM-204ENST00000475189 C9P02748 559 aa15.81■□□□□ 0.12
SRM-204ENST00000475189 ESR1P03372 595 aa15.81■□□□□ 0.12
SRM-204ENST00000475189 HGFP14210 728 aa15.81■□□□□ 0.12
SRM-204ENST00000475189 SLC1A2P43004 574 aa15.81■□□□□ 0.12
SRM-204ENST00000475189 CAPZBP47756 277 aa15.81■□□□□ 0.12
SRM-204ENST00000475189 GFERP55789 205 aa15.81■□□□□ 0.12
SRM-204ENST00000475189 HSPA14Q0VDF9 509 aa15.81■□□□□ 0.12
SRM-204ENST00000475189 MN1Q10571 1320 aaPredicted RBP15.81■□□□□ 0.12
SRM-204ENST00000475189 CALCOCO2Q13137 446 aa15.81■□□□□ 0.12
SRM-204ENST00000475189 TUBB2AQ13885 445 aa15.81■□□□□ 0.12
SRM-204ENST00000475189 KRT33BQ14525 404 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms