RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 LIG4P49917 911 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 DGKEP52429 567 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 CDH4P55283 916 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 SRSF2Q01130 221 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 C2orf54Q08AI8 447 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 MGAT5Q09328 741 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PDCD1Q15116 288 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ADRM1Q16186 407 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 CRY2Q49AN0 593 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 GTDC1Q4AE62 458 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 COLEC12Q5KU26 742 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 BRMS1LQ5PSV4 323 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 TCERG1LQ5VWI1 586 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 CST9LP1Q5W188 147 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 CRELD2Q6UXH1 353 aaPredicted RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 CLEC9AQ6UXN8 241 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 KATNAL2Q8IYT4 538 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF366Q8N895 744 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 LEMD2Q8NC56 503 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ELP5Q8TE02 316 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 DTD1Q8TEA8 209 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 DUSP19Q8WTR2 217 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PYDC1Q8WXC3 89 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 BRF1Q92994 677 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PMEPA1Q969W9 287 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 SUSD3Q96L08 255 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 RANBP9Q96S59 729 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 UBAC1Q9BSL1 405 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 OR51B6Q9H340 312 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ECT2Q9H8V3 914 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 GMPR2Q9P2T1 348 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 WNT16Q9UBV4 365 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 APOBEC3BQ9UH17 382 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 LIMA1Q9UHB6 759 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 TMEM59LQ9UK28 342 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF214Q9UL59 606 aaPredicted RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PLAGL2Q9UPG8 496 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PLEKHM1Q9Y4G2 1056 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 UBE4BO95155 1302 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 A0A087WZY1 265 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 MEX3AA1L020 520 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ISM1B1AKI9 464 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 H7C1Q1 480 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 DYNC1LI2O43237 492 aaPredicted RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 SEC14L5O43304 696 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PFKFB2O60825 505 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 OPHN1O60890 802 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 NOS1APO75052 506 aaPredicted RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 SASH3O75995 380 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF202O95125 648 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 SIX3O95343 332 aaPredicted RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 GNAI2P04899 355 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PRKCBP05771 671 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ANXA5P08758 320 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 OR4E1P0C645 316 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 SLC2A3P11169 496 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 SRCP12931 536 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PGM1P36871 562 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 MTNR1BP49286 362 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 CLCN7P51798 805 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PSMD4P55036 377 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ITGA1P56199 1179 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PHC1P78364 1004 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 MRPS25P82663 173 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ATP11AP98196 1134 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 FCHO2Q0JRZ9 810 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 SNTB1Q13884 538 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 CAMK4Q16566 473 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PNLIPRP3Q17RR3 467 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PRSS53Q2L4Q9 553 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 C1orf146Q5VVC0 180 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 METTL21CQ5VZV1 264 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 MOXD1Q6UVY6 613 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 NDUFAF7Q7L592 441 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 COPS6Q7L5N1 327 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ZFAND4Q86XD8 727 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 TIGD4Q8IY51 512 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 OR52N1Q8NH53 320 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 NFKBIDQ8NI38 313 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 DVL3Q92997 716 aaPredicted RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 MMP19Q99542 508 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PAPOLGQ9BWT3 736 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PARD6GQ9BYG4 376 aaPredicted RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 SLC25A18Q9H1K4 315 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 POFUT1Q9H488 388 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 EPB41L1Q9H4G0 881 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 TLR8Q9NR97 1041 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PARVAQ9NVD7 372 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ARL8BQ9NVJ2 186 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 OXSMQ9NWU1 459 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PLA2G3Q9NZ20 509 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 DNAJB11Q9UBS4 358 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 WARS2Q9UGM6 360 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 SNX7Q9UNH6 387 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 HEG1Q9ULI3 1381 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 WDFY4Q6ZS81 3184 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 KANSL1LA0AUZ9 987 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 FAM149AA5PLN7 773 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 YDJCA8MPS7 323 aa5.98□□□□□ -1.45
SMARCE1-208ENST00000474246 GRXCR1A8MXD5 290 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms