RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 ZNF558Q96NG5 402 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 ZNF582Q96NG8 517 aaPredicted RBP3.91□□□□□ -1.78
PRPF3-204ENST00000470824 CAMK1GQ96NX5 476 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 FERMT1Q9BQL6 677 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 NEURL2Q9BR09 285 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 IL25Q9H293 177 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 DPAGT1Q9H3H5 408 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 SLA2Q9H6Q3 261 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 TBC1D17Q9HA65 648 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 UBTD1Q9HAC8 227 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 NPAP1Q9NZP6 1156 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 RHCGQ9UBD6 479 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 RNF7Q9UBF6 113 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 KCNS2Q9ULS6 477 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 LIPGQ9Y5X9 500 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 FLT1P17948 1338 aa3.91□□□□□ -1.78
PRPF3-204ENST00000470824 A0A0G2JPF8 293 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 ZCWPW2A0A1B0GU75 182 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 A0A1W2PPM1 405 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 ELOVL7A1L3X0 281 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 HNRNPCL3B7ZW38 293 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 TMEM178BH3BS89 294 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 CCDC188H7C350 402 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 TRIM77I1YAP6 450 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 PSMA7O14818 248 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 BMP15O95972 392 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 ACAA1P09110 424 aaPredicted RBP3.9□□□□□ -1.79
PRPF3-204ENST00000470824 HNRNPCL4P0DMR1 293 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 DAOP14920 347 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 HOXC13P31276 330 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 CAPZA1P52907 286 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 POLGP54098 1239 aaPredicted RBP3.9□□□□□ -1.79
PRPF3-204ENST00000470824 BRWD1-AS2P59051 145 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 KLHL26Q53HC5 615 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 CAVIN1Q6NZI2 390 aaKnown RBP3.9□□□□□ -1.79
PRPF3-204ENST00000470824 KLC3Q6P597 504 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 GFRALQ6UXV0 394 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 PPP1R21Q6ZMI0 780 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 ASB18Q6ZVZ8 466 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 MEPCEQ7L2J0 689 aaKnown RBP3.9□□□□□ -1.79
PRPF3-204ENST00000470824 GLRX5Q86SX6 157 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 TMEM219Q86XT9 240 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 KMT5CQ86Y97 462 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 CCAR2Q8N163 923 aaKnown RBP3.9□□□□□ -1.79
PRPF3-204ENST00000470824 RBMXL3Q8N7X1 1067 aaKnown RBP3.9□□□□□ -1.79
PRPF3-204ENST00000470824 ROBO4Q8WZ75 1007 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 FIG4Q92562 907 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 SFXN2Q96NB2 322 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 LRRC3BQ96PB8 259 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 SLX1AQ9BQ83 275 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 MGME1Q9BQP7 344 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 THUMPD3Q9BV44 507 aaKnown RBP3.9□□□□□ -1.79
PRPF3-204ENST00000470824 MIOSQ9NXC5 875 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.9□□□□□ -1.79
PRPF3-204ENST00000470824 OR2W1Q9Y3N9 320 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.9□□□□□ -1.796e-8■■■■■ 29
PRPF3-204ENST00000470824 IFT140Q96RY7 1462 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 PBRM1Q86U86 1689 aa3.9□□□□□ -1.79
PRPF3-204ENST00000470824 DNMBPQ6XZF7 1577 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 TARBP1Q13395 1621 aaKnown RBP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 TRAV34A0A0B4J273 112 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 MED19A0JLT2 244 aaPredicted RBP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 ANXA2P2A6NMY6 339 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 ZNF587BE7ETH6 402 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 H0Y626 953 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 EIF3DO15371 548 aaKnown RBP eCLIP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 SYNCRIPO60506 623 aaKnown RBP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 WDR1O75083 606 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 LDB3O75112 727 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 WISP2O76076 250 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 SLU7O95391 586 aaKnown RBP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 ATP5BP06576 529 aaKnown RBP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 RAB40ALP0C0E4 278 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 ZNF23P17027 643 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 GM2AP17900 193 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 MUTP22033 750 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 PSMC4P43686 418 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 TNNT3P45378 269 aaPredicted RBP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 ARCN1P48444 511 aaKnown RBP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 ASCL1P50553 236 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 BMXP51813 675 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 MLLT10P55197 1068 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 HNRNPKP61978 463 aaKnown RBP eCLIP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 RELQ04864 619 aaPredicted RBP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 RUNX1T1Q06455 604 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 LTBQ06643 244 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 SF3B4Q15427 424 aaKnown RBP eCLIP3.89□□□□□ -1.794e-8■■■■□ 22.4
PRPF3-204ENST00000470824 AWAT2Q6E213 333 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 OR7E24Q6IFN5 339 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 C11orf88Q6PI97 169 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 TMPRSS11FQ6ZWK6 438 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 SFR1Q86XK3 245 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 MUC20Q8N307 709 aaPredicted RBP3.89□□□□□ -1.79
PRPF3-204ENST00000470824 PPFIBP2Q8ND30 876 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 B4GALNT2Q8NHY0 566 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 SPSB1Q96BD6 273 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 RTP4Q96DX8 246 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 ADGRG7Q96K78 797 aa3.89□□□□□ -1.79
PRPF3-204ENST00000470824 TMEM204Q9BSN7 226 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 207.7 ms