RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 TRIM56Q9BRZ2 755 aaKnown RBP17.35■□□□□ 0.37
MRPL28-208ENST00000469744 KIFC1Q9BW19 673 aa17.35■□□□□ 0.37
MRPL28-208ENST00000469744 SLC25A51Q9H1U9 297 aa17.35■□□□□ 0.37
MRPL28-208ENST00000469744 MRM3Q9HC36 420 aaKnown RBP17.35■□□□□ 0.37
MRPL28-208ENST00000469744 TAAR2Q9P1P5 351 aa17.35■□□□□ 0.37
MRPL28-208ENST00000469744 ZFATQ9P243 1243 aa17.35■□□□□ 0.37
MRPL28-208ENST00000469744 RNF215Q9Y6U7 377 aa17.35■□□□□ 0.37
MRPL28-208ENST00000469744 CAPN7Q9Y6W3 813 aa17.35■□□□□ 0.37
MRPL28-208ENST00000469744 CACNA1GO43497 2377 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 ZCWPW2A0A1B0GU75 182 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 A0A1W2PQM1 296 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 FADS2P1A8MWK0 482 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 NTN3O00634 580 aaPredicted RBP17.34■□□□□ 0.37
MRPL28-208ENST00000469744 PMPCBO75439 489 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 DCTN3O75935 186 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 EIF2S3P41091 472 aaKnown RBP17.34■□□□□ 0.37
MRPL28-208ENST00000469744 SPINT3P49223 89 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 CSE1LP55060 971 aaKnown RBP17.34■□□□□ 0.37
MRPL28-208ENST00000469744 CTBSQ01459 385 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 CERCAMQ5T4B2 595 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 MROH9Q5TGP6 573 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 ZDHHC1Q8WTX9 485 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 PATE1Q8WXA2 126 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 TADA1Q96BN2 335 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 ZNF669Q96BR6 464 aaPredicted RBP17.34■□□□□ 0.37
MRPL28-208ENST00000469744 EID2BQ96D98 161 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 FCRL3Q96P31 734 aaPredicted RBP17.34■□□□□ 0.37
MRPL28-208ENST00000469744 GSDMCQ9BYG8 508 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 POLR1BQ9H9Y6 1135 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 ABCF3Q9NUQ8 709 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 TRNAU1APQ9NX07 287 aaKnown RBP17.34■□□□□ 0.37
MRPL28-208ENST00000469744 TXNDC16Q9P2K2 825 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 DCDC2Q9UHG0 476 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 PRKAB1Q9Y478 270 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 PCYT1BQ9Y5K3 369 aaPredicted RBP17.34■□□□□ 0.37
MRPL28-208ENST00000469744 OAS3Q9Y6K5 1087 aaKnown RBP17.34■□□□□ 0.37
MRPL28-208ENST00000469744 PTPRQQ9UMZ3 2332 aa17.34■□□□□ 0.37
MRPL28-208ENST00000469744 D6RAR5 112 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 AGRPO00253 132 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 GLRA3O75311 464 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 GLB1P16278 677 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 SPRP35270 261 aaPredicted RBP17.33■□□□□ 0.37
MRPL28-208ENST00000469744 HADHAP40939 763 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 SKIV2L2P42285 1042 aaKnown RBP17.33■□□□□ 0.37
MRPL28-208ENST00000469744 MAGEA12P43365 314 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 CDK18Q07002 472 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 BMPR2Q13873 1038 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 PCID2Q5JVF3 399 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 HENMT1Q5T8I9 393 aaKnown RBP17.33■□□□□ 0.37
MRPL28-208ENST00000469744 ATG16L1Q676U5 607 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 SNIP1Q8TAD8 396 aaKnown RBP17.33■□□□□ 0.37
MRPL28-208ENST00000469744 C10orf82Q8WW14 230 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 FGF11Q92914 225 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 NAF1Q96HR8 494 aaKnown RBP17.33■□□□□ 0.37
MRPL28-208ENST00000469744 COX14Q96I36 57 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 OR2M4Q96R27 311 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 GFM1Q96RP9 751 aaKnown RBP17.33■□□□□ 0.37
MRPL28-208ENST00000469744 TBL1YQ9BQ87 522 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 SLCO1B3Q9NPD5 702 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 PKD2L2Q9NZM6 624 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 LRIT1Q9P2V4 623 aa17.33■□□□□ 0.37
MRPL28-208ENST00000469744 ATXN7L1Q9ULK2 861 aaPredicted RBP17.33■□□□□ 0.37
MRPL28-208ENST00000469744 CNOT6Q9ULM6 557 aaKnown RBP17.33■□□□□ 0.37
MRPL28-208ENST00000469744 SCN8AQ9UQD0 1980 aa17.33■□□□□ 0.36
MRPL28-208ENST00000469744 CFAP73A6NFT4 308 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 FGF1P05230 155 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 ITGA2BP08514 1039 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 ADRA1AP35348 466 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 LSSP48449 732 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 BNIP1Q12981 228 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 MPP3Q13368 585 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 CDHR3Q6ZTQ4 885 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 SPRED1Q7Z699 444 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 OR6C4Q8NGE1 309 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 WDR48Q8TAF3 677 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 SCARF2Q96GP6 870 aaPredicted RBP17.32■□□□□ 0.36
MRPL28-208ENST00000469744 RBBP8Q99708 897 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 TSSK1BQ9BXA7 367 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 CDH19Q9H159 772 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 LRRN3Q9H3W5 708 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 FAM83DQ9H4H8 585 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 ZFYVE1Q9HBF4 777 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 ZNF711Q9Y462 761 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 BPTFQ12830 3046 aa17.32■□□□□ 0.36
MRPL28-208ENST00000469744 WDR91A4D1P6 747 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 H0YHG0 523 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 ATP5HO75947 161 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 UBOX5O94941 541 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 PYGLP06737 847 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 ACTR1BP42025 376 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 ABCG1P45844 678 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 ACTR1AP61163 376 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 SETDB1Q15047 1291 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 SPRED3Q2MJR0 410 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 PYCR3Q53H96 274 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 TEDDM1Q5T9Z0 273 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 PDPK2PQ6A1A2 396 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 PDZD3Q86UT5 571 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 NLRP8Q86W28 1048 aa17.31■□□□□ 0.36
MRPL28-208ENST00000469744 GALNT13Q8IUC8 556 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms