RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 CPN2P22792 545 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 MMP8P22894 467 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 ACVR2AP27037 513 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RFC2P35250 354 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 ELK3P41970 407 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 NPY2RP49146 381 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CDK8P49336 464 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RENBPP51606 427 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 VAMP7P51809 220 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 DGKQP52824 942 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CDH13P55290 713 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RPP38P78345 283 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 NKX3-2P78367 333 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 POU6F2P78424 691 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 TEKQ02763 1124 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 PTPN11Q06124 597 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SCN1BQ07699 218 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RGS1Q08116 209 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 TFDP2Q14188 446 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 DPYSL3Q14195 570 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 GBX1Q14549 363 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 FASTKD3Q14CZ7 662 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 LLGL1Q15334 1064 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 TPSAB1Q15661 275 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 GRK1Q15835 563 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 MLANAQ16655 118 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 NKPD1Q17RQ9 610 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 FNDC3BQ53EP0 1204 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 ASPRV1Q53RT3 343 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CLLU1Q5K131 121 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 C6orf141Q5SZD1 244 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 MPP7Q5T2T1 576 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 PXDC1Q5TGL8 231 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 STEAP3Q658P3 488 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SLC9A4Q6AI14 798 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 BICRALQ6AI39 1079 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 TYW3Q6IPR3 259 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 BRAT1Q6PJG6 821 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SLC16A12Q6ZSM3 486 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 KRT74Q7RTS7 529 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 GPAT4Q86UL3 456 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 AMIGO1Q86WK6 493 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 DNAAF5Q86Y56 855 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 KSR1Q8IVT5 923 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 TAGAPQ8N103 731 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 MINDY1Q8N5J2 469 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 APPL2Q8NEU8 664 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 TMIEQ8NEW7 156 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 FEZF2Q8TBJ5 459 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 TAS1R2Q8TE23 839 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SLC22A17Q8WUG5 538 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 DEDD2Q8WXF8 326 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 KIAA1143Q96AT1 154 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 C18orf25Q96B23 403 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 LGALS12Q96DT0 336 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RTP4Q96DX8 246 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 YIPF6Q96EC8 236 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CCDC126Q96EE4 140 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SGTBQ96EQ0 304 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RNF170Q96K19 258 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 HSFY1Q96LI6 401 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 C1orf74Q96LT6 269 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF300Q96RE9 604 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SERINC2Q96SA4 455 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 DPYSL5Q9BPU6 564 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RBM4BQ9BQ04 359 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RBM4Q9BWF3 364 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF416Q9BWM5 594 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SLC19A3Q9BZV2 496 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SLIRPQ9GZT3 109 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 NAA50Q9GZZ1 169 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RACGAP1Q9H0H5 632 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 FAM49AQ9H0Q0 323 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SPNS1Q9H2V7 528 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 LDAHQ9H6V9 325 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 NTN4Q9HB63 628 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 EML4Q9HC35 981 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SNX15Q9NRS6 342 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RGS18Q9NS28 235 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 POLR3BQ9NW08 1133 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 NSMCE4AQ9NXX6 385 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SAGE1Q9NXZ1 904 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 TMOD3Q9NYL9 352 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 EHD3Q9NZN3 535 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 KIF25Q9UIL4 384 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 C3orf18Q9UK00 162 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 ING4Q9UNL4 249 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 KLHL20Q9Y2M5 609 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 PCDHGA7Q9Y5G6 932 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 PCDHA11Q9Y5I1 949 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 LYVE1Q9Y5Y7 322 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 DGKBQ9Y6T7 804 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RNF215Q9Y6U7 377 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 TNRC6CQ9HCJ0 1690 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CICQ96RK0 1608 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 LTN1O94822 1766 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 RBBP6Q7Z6E9 1792 aaKnown RBP4.78□□□□□ -1.64
SF3B1-207ENST00000468925 PTPRJQ12913 1337 aa4.78□□□□□ -1.64
SF3B1-207ENST00000468925 ATP6AP2A0A1C7CYW4 349 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms