RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SPATA4Q8NEY3 305 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 IPMKQ8NFU5 416 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 OR13J1Q8NGT2 312 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 GANCQ8TET4 914 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 SCAMP4Q969E2 229 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 MAGOHBQ96A72 148 aaKnown RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 NUS1Q96E22 293 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 RUNDC3BQ96NL0 473 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 AGAP2Q99490 1192 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 TBL1YQ9BQ87 522 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 ZSCAN5AQ9BUG6 496 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 WRAP53Q9BUR4 548 aaKnown RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 APOOQ9BUR5 198 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 EDEM2Q9BV94 578 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 TUBB2BQ9BVA1 445 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 KIFC1Q9BW19 673 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 LGR4Q9BXB1 951 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 AP1M1Q9BXS5 423 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 TWSG1Q9GZX9 223 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 DDX47Q9H0S4 455 aaKnown RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 L2HGDHQ9H9P8 463 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 PLAC1Q9HBJ0 212 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 FGF22Q9HCT0 170 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 FZD3Q9NPG1 666 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 TMEM9BQ9NQ34 198 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 GDF3Q9NR23 364 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 NLE1Q9NVX2 485 aaPredicted RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 SEPT10Q9P0V9 454 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 GULP1Q9UBP9 304 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 CDC23Q9UJX2 597 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 PPT2Q9UMR5 302 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 WASF3Q9UPY6 502 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 CA5BQ9Y2D0 317 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 MRFAP1Q9Y605 127 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 U3KQA8 63 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 KIF26BQ2KJY2 2108 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 FREM2Q5SZK8 3169 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 ACACAQ13085 2346 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 GOLGA6L10A0A0M3HER8 536 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 TCRBV7S3A2A0A539 114 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 GOLGA6CA6NDK9 693 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 GOLGA6BA6NDN3 693 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 TMEM202A6NGA9 273 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 E7ESA3 106 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 LMO7DNF2Z398 122 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 AP3B1O00203 1094 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 NEMP1O14524 444 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 SCAMP1O15126 338 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 ZNF500O60304 480 aaPredicted RBP5.67□□□□□ -1.5
VPS36-202ENST00000462289 USP12O75317 370 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 SEC31AO94979 1220 aaKnown RBP5.67□□□□□ -1.5
VPS36-202ENST00000462289 KRT14P02533 472 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 TP53P04637 393 aaPredicted RBP5.67□□□□□ -1.5
VPS36-202ENST00000462289 CELA3BP08861 270 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 GOLGA6DP0CG33 693 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 LPOP22079 712 aaPredicted RBP5.67□□□□□ -1.5
VPS36-202ENST00000462289 XPAP23025 273 aaPredicted RBP5.67□□□□□ -1.5
VPS36-202ENST00000462289 DGKAP23743 735 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 LIMS1P48059 325 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 CCT8P50990 548 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 HK3P52790 923 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 EPHB1P54762 984 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 NFKB2Q00653 900 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 PDE1BQ01064 536 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 SEMG2Q02383 582 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 ITKQ08881 620 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 CDH17Q12864 832 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 SNX1Q13596 522 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 DHX34Q14147 1143 aaKnown RBP5.67□□□□□ -1.5
VPS36-202ENST00000462289 ARHGEF7Q14155 803 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 FRG1Q14331 258 aaKnown RBP5.67□□□□□ -1.5
VPS36-202ENST00000462289 PRPSAP1Q14558 356 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 NR1D2Q14995 579 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 CCDC6Q16204 474 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 ALG11Q2TAA5 492 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 KHDC1Q4VXA5 237 aaKnown RBP5.67□□□□□ -1.5
VPS36-202ENST00000462289 CFAP58Q5T655 872 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 ANKRD22Q5VYY1 191 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 DUPD1Q68J44 220 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 LRRC8BQ6P9F7 803 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 LVRNQ6Q4G3 990 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 SYT10Q6XYQ8 523 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 TMEM135Q86UB9 458 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 HEATR4Q86WZ0 1026 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 NRROSQ86YC3 692 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 ZNF547Q8IVP9 402 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 CCDC89Q8N998 374 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 OR4C6Q8NH72 309 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 CCHCR1Q8TD31 782 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 GRK7Q8WTQ7 553 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 STYXQ8WUJ0 223 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 PDCD6IPQ8WUM4 868 aaKnown RBP5.67□□□□□ -1.5
VPS36-202ENST00000462289 BTN2A2Q8WVV5 523 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 KLK6Q92876 244 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 SKA1Q96BD8 255 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 AP2M1Q96CW1 435 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 RMDN1Q96DB5 314 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 PDXPQ96GD0 296 aa5.67□□□□□ -1.5
VPS36-202ENST00000462289 LINC00615Q96LM1 132 aaPredicted RBP5.67□□□□□ -1.5
VPS36-202ENST00000462289 WDR83Q9BRX9 315 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms