RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 HEBP2Q9Y5Z4 205 aa14.2□□□□□ -0.14
HSPG2-207ENST00000453796 SNRNP200O75643 2136 aaKnown RBP14.2□□□□□ -0.14
HSPG2-207ENST00000453796 IGHV5-51A0A0C4DH38 117 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 SLC5A10A0PJK1 596 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 AP3B1O00203 1094 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 PGRMC1O00264 195 aaKnown RBP14.19□□□□□ -0.14
HSPG2-207ENST00000453796 CES2O00748 559 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 LIN7AO14910 233 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-207ENST00000453796 POLR1CO15160 346 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-207ENST00000453796 ATXN7O15265 892 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-207ENST00000453796 DLGAP3O95886 979 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 NELFEP18615 380 aaKnown RBP14.19□□□□□ -0.14
HSPG2-207ENST00000453796 NDUFS1P28331 727 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 NMBRP28336 390 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 COILP38432 576 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-207ENST00000453796 PREPP48147 710 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 SEPHS1P49903 392 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 SH3BP2P78314 561 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 PRAMEP78395 509 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 GSE1Q14687 1217 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 PLCL1Q15111 1095 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 TRIP13Q15645 432 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-207ENST00000453796 MANEAQ5SRI9 462 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 CACHD1Q5VU97 1274 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 IRGCQ6NXR0 463 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 KLHL35Q6PF15 583 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 FAM92BQ6ZTR7 304 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 VASH2Q86V25 355 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 OR6P1Q8NGX9 317 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 ACTRT1Q8TDG2 376 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.19□□□□□ -0.14
HSPG2-207ENST00000453796 SLC41A2Q96JW4 573 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 MAP3K3Q99759 626 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 KIFC1Q9BW19 673 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 MRM3Q9HC36 420 aaKnown RBP14.19□□□□□ -0.14
HSPG2-207ENST00000453796 SYBUQ9NX95 663 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 TRMT1Q9NXH9 659 aaKnown RBP14.19□□□□□ -0.14
HSPG2-207ENST00000453796 BFARQ9NZS9 450 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 MARCH4Q9P2E8 410 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-207ENST00000453796 SNX12Q9UMY4 172 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 PCDHB11Q9Y5F2 797 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 COLEC10Q9Y6Z7 277 aa14.19□□□□□ -0.14
HSPG2-207ENST00000453796 USP27XA6NNY8 438 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 ERVH48-1M5A8F1 160 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 RAD1O60671 282 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 RASSF9O75901 435 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 KRT14P02533 472 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 FTH1P02794 183 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 OR56A5P0C7T3 313 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 MGAT1P26572 445 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 ARNTP27540 789 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 ACADLP28330 430 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 VPS41P49754 854 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 RHDQ02161 417 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 GPS1Q13098 491 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 BOP1Q14137 746 aaKnown RBP14.18□□□□□ -0.14
HSPG2-207ENST00000453796 FASTKD1Q53R41 847 aaKnown RBP14.18□□□□□ -0.14
HSPG2-207ENST00000453796 ANKRD22Q5VYY1 191 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 CCDC137Q6PK04 289 aaKnown RBP14.18□□□□□ -0.14
HSPG2-207ENST00000453796 TIPARPQ7Z3E1 657 aaKnown RBP14.18□□□□□ -0.14
HSPG2-207ENST00000453796 OOSP2Q86WS3 158 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 LSM14AQ8ND56 463 aaKnown RBP14.18□□□□□ -0.14
HSPG2-207ENST00000453796 ACVR1CQ8NER5 493 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 CPT1BQ92523 772 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 UBXN4Q92575 508 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 NAP1L3Q99457 506 aaPredicted RBP14.18□□□□□ -0.14
HSPG2-207ENST00000453796 CD180Q99467 661 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 NRTNQ99748 197 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 CATSPERZQ9NTU4 200 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 HRASLS2Q9NWW9 162 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 SOX13Q9UN79 622 aa14.18□□□□□ -0.14
HSPG2-207ENST00000453796 SPTBP11277 2137 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 OR6C74A6NCV1 312 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 TLCD2A6NGC4 264 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 BHMG1C9JSJ3 638 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-207ENST00000453796 IFRD1O00458 451 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-207ENST00000453796 ZNF185O15231 689 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 STK17BO94768 372 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 TMEM63AO94886 807 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 FGF5P12034 268 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 KPNA2P52292 529 aaKnown RBP14.17□□□□□ -0.14
HSPG2-207ENST00000453796 KIAA1614Q5VZ46 1190 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 ARMC3Q5W041 872 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 NAPRTQ6XQN6 538 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 LDB1Q86U70 411 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-207ENST00000453796 CAND1Q86VP6 1230 aaKnown RBP14.17□□□□□ -0.14
HSPG2-207ENST00000453796 KMT5CQ86Y97 462 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 CACNA2D3Q8IZS8 1091 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 PHC3Q8NDX5 983 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 OR52E1Q8NGJ3 308 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 LKAAEAR1Q8TD35 194 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 ELMO1Q92556 727 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 TFGQ92734 400 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-207ENST00000453796 MFSD3Q96ES6 412 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 OR6C1Q96RD1 312 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 FERD3LQ96RJ6 166 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 TTC1Q99614 292 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 TWSG1Q9GZX9 223 aa14.17□□□□□ -0.14
HSPG2-207ENST00000453796 TFB2MQ9H5Q4 396 aaKnown RBP14.17□□□□□ -0.14
HSPG2-207ENST00000453796 MVB12BQ9H7P6 319 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms