RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 GSDMDP57764 484 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 TUBB3Q13509 450 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 SIX1Q15475 284 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-208ENST00000452047 MEI1Q5TIA1 1274 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 CYB5D1Q6P9G0 228 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 C6orf15Q6UXA7 325 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-208ENST00000452047 CERS6Q6ZMG9 384 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 PPP1R3BQ86XI6 285 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 KMT5CQ86Y97 462 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 RASGRP3Q8IV61 690 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 D2HGDHQ8N465 521 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 SIDT2Q8NBJ9 832 aaKnown RBP12.15□□□□□ -0.46
CPSF4-208ENST00000452047 GALNT6Q8NCL4 622 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 ACVR1CQ8NER5 493 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 OR52K1Q8NGK4 314 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 OR13J1Q8NGT2 312 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 C1orf54Q8WWF1 131 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 ADNPQ9H2P0 1102 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 VPS37BQ9H9H4 285 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 ETNK1Q9HBU6 452 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 HEBP2Q9Y5Z4 205 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 MRPS18BQ9Y676 258 aaKnown RBP12.15□□□□□ -0.46
CPSF4-208ENST00000452047 COLEC10Q9Y6Z7 277 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 UBA6A0AVT1 1052 aaPredicted RBP12.14□□□□□ -0.47
CPSF4-208ENST00000452047 CCDC78A2IDD5 438 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 OR51F1A6NGY5 319 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 GOLGA6L6A8MZA4 724 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 ARHGAP6O43182 974 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 AP2A2O94973 939 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 IFNB1P01574 187 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 GSTM1P09488 218 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 PRKAR1AP10644 381 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 PDHA2P29803 388 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 FDFT1P37268 417 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 GRIA1P42261 906 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 ARCN1P48444 511 aaKnown RBP12.14□□□□□ -0.47
CPSF4-208ENST00000452047 CD151P48509 253 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 POLE2P56282 527 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 HSD11B2P80365 405 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 GSTM4Q03013 218 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 ACY1Q03154 408 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 CDH17Q12864 832 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 RPA4Q13156 261 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 SEMA5AQ13591 1074 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 ITIH4Q14624 930 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 GSE1Q14687 1217 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 CCDC38Q502W7 563 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 PWWP2BQ6NUJ5 590 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 PACS1Q6VY07 963 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 TAS2R42Q7RTR8 314 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 PRUNE1Q86TP1 453 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 CARFQ8N187 725 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 GLIS1Q8NBF1 620 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 STAMBPL1Q96FJ0 436 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 PPM1MQ96MI6 270 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 FCRL4Q96PJ5 515 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 PDE7BQ9NP56 450 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 FGF21Q9NSA1 209 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 LNPEPQ9UIQ6 1025 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 CROTQ9UKG9 612 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 POMT2Q9UKY4 750 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 RARRES3Q9UL19 164 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 BTRCQ9Y297 605 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 PRSS21Q9Y6M0 314 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 RELNP78509 3460 aa12.14□□□□□ -0.47
CPSF4-208ENST00000452047 FLNBO75369 2602 aaKnown RBP12.13□□□□□ -0.47
CPSF4-208ENST00000452047 HEATR9A2RTY3 570 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 CCDC162PA2VCL2 907 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 SLC28A2O43868 658 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 ZBTB11O95625 1053 aaPredicted RBP12.13□□□□□ -0.47
CPSF4-208ENST00000452047 ETS1P14921 441 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 POLR2CP19387 275 aaPredicted RBP12.13□□□□□ -0.47
CPSF4-208ENST00000452047 DLSTP36957 453 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 NSG1P42857 185 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 PREPP48147 710 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 MC1RQ01726 317 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 ACVR1Q04771 509 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 KCNAB2Q13303 367 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 SNX1Q13596 522 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 BOP1Q14137 746 aaKnown RBP12.13□□□□□ -0.47
CPSF4-208ENST00000452047 RPS6KA1Q15418 735 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 SKIDA1Q1XH10 827 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 ATP1A1-AS1Q5TC04 95 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 ZNF662Q6ZS27 426 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 BPHLQ86WA6 291 aaPredicted RBP12.13□□□□□ -0.47
CPSF4-208ENST00000452047 DNAAF3Q8N9W5 541 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 OR4E2Q8NGC2 313 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 ZNF778Q96MU6 729 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 RANBP9Q96S59 729 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 NRTNQ99748 197 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 SLC25A18Q9H1K4 315 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 CASS4Q9NQ75 786 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 RAB6BQ9NRW1 208 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 SMARCAL1Q9NZC9 954 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 SLC2A6Q9UGQ3 507 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 TUBD1Q9UJT1 453 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 RIMKLBQ9ULI2 386 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 ZNF148Q9UQR1 794 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 PCDHGA6Q9Y5G7 932 aa12.13□□□□□ -0.47
CPSF4-208ENST00000452047 COL12A1Q99715 3063 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms