RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 GMIPQ9P107 970 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 EVLQ9UI08 416 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MRTO4Q9UKD2 239 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 RUVBL1Q9Y265 456 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 COQ4Q9Y3A0 265 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 CACNB4O00305 520 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 XKRYO14609 159 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 UGT1A9O60656 530 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 KRT33AO76009 404 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 ADH1AP07327 375 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 XRCC1P18887 633 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 UGT1A6P19224 532 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 UGT1A1P22309 533 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 UGT1A4P22310 534 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 UGT1A3P35503 534 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 ARL2P36404 184 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 PTGER3P43115 390 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 ERVK-8P63133 956 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 GNA12Q03113 381 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF460Q14592 562 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 TMEM44Q2T9K0 475 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 PLEKHG6Q3KR16 790 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 KLHL22Q53GT1 634 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 PRAMEF19Q5SWL8 479 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 KLHDC10Q6PID8 442 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 FRRS1Q6ZNA5 592 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 TRIM74Q86UV6 250 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 TRIM73Q86UV7 250 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 OR10G6Q8NH81 332 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 CANT1Q8WVQ1 401 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 GPER1Q99527 375 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 GPR20Q99678 358 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 NIFKQ9BYG3 293 aaKnown RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 MAGEH1Q9H213 219 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 UGT1A7Q9HAW7 530 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 UGT1A10Q9HAW8 530 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 UGT1A8Q9HAW9 530 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 C11orf16Q9NQ32 467 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 PPM1HQ9ULR3 514 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 CARD8Q9Y2G2 431 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 TRIM3O75382 744 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 CDH1P12830 882 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 OR1D2P34982 312 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 RORCP51449 518 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 VBP1P61758 197 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 DUSP4Q13115 394 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 TIGD6Q17RP2 521 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 ATP13A5Q4VNC0 1218 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF311Q5JNZ3 666 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 TMEM198Q66K66 360 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 ANO7Q6IWH7 933 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 UBE2J2Q8N2K1 259 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 NAT8LQ8N9F0 302 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 BRSK1Q8TDC3 778 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 TSEN15Q8WW01 171 aaKnown RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 SLC9A6Q92581 669 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 PIGKQ92643 395 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 FAXDC2Q96IV6 333 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 ERMAPQ96PL5 475 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 SLC4A9Q96Q91 983 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 OAZ3Q9UMX2 235 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 RPL36Q9Y3U8 105 aaKnown RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 CPSF4LA6NMK7 179 aaKnown RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 GRM6O15303 877 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF432O94892 652 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 GNRH1P01148 92 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 KELP23276 732 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 NDST2P52849 883 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 DCDC1P59894 354 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 SF1Q15637 639 aaKnown RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 IQCCQ4KMZ1 466 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 NOL9Q5SY16 702 aaKnown RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 KIAA1324Q6UXG2 1013 aaKnown RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 SNX20Q7Z614 316 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 PPTC7Q8NI37 304 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 TP53INP1Q96A56 240 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 CDADC1Q9BWV3 514 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 BRINP2Q9C0B6 783 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 SLC22A4Q9H015 551 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 FAM83DQ9H4H8 585 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 APOBEC3GQ9HC16 384 aaKnown RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 OXSMQ9NWU1 459 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 UPB1Q9UBR1 384 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 PCDHGA11Q9Y5H2 935 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 GABRDO14764 452 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 MID1O15344 667 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 MSCO60682 206 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 GIMD1P0DJR0 217 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 PRKAR2AP13861 404 aaKnown RBP7.67□□□□□ -1.18
NEDD9-204ENST00000448183 SLC1A2P43004 574 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 MVKQ03426 396 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 BNIP3Q12983 259 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 CAMK1Q14012 370 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 HEPACAMQ14CZ8 416 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 ULK3Q6PHR2 472 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 TAC4Q86UU9 113 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 HID1Q8IV36 788 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 C5orf34Q96MH7 638 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 CCDC115Q96NT0 180 aa7.67□□□□□ -1.18
NEDD9-204ENST00000448183 TTPALQ9BTX7 342 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms