RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 LRRC3BQ96PB8 259 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 WRAP53Q9BUR4 548 aaKnown RBP16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 SUN2Q9UH99 717 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 HS3ST2Q9Y278 367 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 GBF1Q92538 1859 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 CCDC154A6NI56 674 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 SLC22A3O75751 556 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 POLR2EP19388 210 aaKnown RBP16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 ITPKAP23677 461 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 BMPR1AP36894 532 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 NEK2P51955 445 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 MRPS35P82673 323 aaKnown RBP16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 GPRC6AQ5T6X5 926 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 HSD11B1LQ7Z5J1 315 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 RNF175Q8N4F7 328 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 SPPL3Q8TCT6 385 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 CANT1Q8WVQ1 401 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 TMEM79Q9BSE2 394 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 BATF3Q9NR55 127 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 CMTM6Q9NX76 183 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 AP4S1Q9Y587 144 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 ATG2BQ96BY7 2078 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 A0A1W2PQ67 120 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 AKAP10O43572 662 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 KLK8O60259 260 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 POP4O95707 220 aaKnown RBP16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 LYNP07948 512 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 FOLH1Q04609 750 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 TSTA3Q13630 321 aaPredicted RBP16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 ADGRE1Q14246 886 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 MTX3Q5HYI7 312 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 SAMD4BQ5PRF9 694 aaKnown RBP16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 FAM109BQ6ICB4 259 aaPredicted RBP16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 GDPD4Q6W3E5 623 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 DHFR2Q86XF0 187 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 SLC15A3Q8IY34 581 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 MRPS23Q9Y3D9 190 aaKnown RBP16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 LOC730098B7Z3J9 87 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 FXYD1O00168 92 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 KPNA3O00505 521 aaPredicted RBP16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 EN2P19622 333 aaPredicted RBP16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 FPGSQ05932 587 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 SFTPA1Q8IWL2 248 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 C7orf61Q8IZ16 206 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 LILRA3Q8N6C8 439 aaPredicted RBP16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 LRRC58Q96CX6 371 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 ZNF382Q96SR6 550 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 CIB1Q99828 191 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 WBP1LQ9NX94 342 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 RIMS3Q9UJD0 308 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 TMPRSS11EQ9UL52 423 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 COQ6Q9Y2Z9 468 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 KIAA1671Q9BY89 1806 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 ASPDHA6ND91 283 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 UPK3BL1B0FP48 263 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 UPK3BL2E5RIL1 263 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 PEX1O43933 1283 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 RSL1D1O76021 490 aaKnown RBP16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 STAMBPO95630 424 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 PSMA3P25788 255 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 RPIAP49247 311 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 ACADVLP49748 655 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 ADARP55265 1226 aaKnown RBP16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 TRAF3Q13114 568 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 BLOC1S3Q6QNY0 202 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 C12orf40Q86WS4 652 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 SLC22A15Q8IZD6 547 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 LMNTD1Q8N9Z9 388 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 FAM81AQ8TBF8 368 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 PPP2R3CQ969Q6 453 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 HTATIP2Q9BUP3 242 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 VCX3BQ9H321 246 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 RIC8BQ9NVN3 520 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 AIG1Q9NVV5 245 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 TMEM181Q9P2C4 612 aa16.5■□□□□ 0.23
LAPTM4B-201ENST00000445593 TRANK1O15050 2925 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 TMEM202A6NGA9 273 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 CKMT2P17540 419 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 NSG1P42857 185 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 POLR2JP52435 117 aaKnown RBP16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 HTRA4P83105 476 aaPredicted RBP16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 IMPG1Q17R60 797 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 FBXO46Q6PJ61 603 aaPredicted RBP16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 UBE2R2Q712K3 238 aaPredicted RBP16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 ADGRG6Q86SQ4 1221 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 LMLNQ96KR4 655 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 TMEM106CQ9BVX2 250 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 PTPRSQ13332 1948 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 SAC3D1A6NKF1 404 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 LINGO3P0C6S8 592 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 SLC6A2P23975 617 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 MTPNP58546 118 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 TMEM240Q5SV17 173 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 CLP1Q92989 425 aaKnown RBP16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 RAD9AQ99638 391 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 RIOK2Q9BVS4 552 aaKnown RBP16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 ACTR8Q9H981 624 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 PCDH12Q9NPG4 1184 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 ZDHHC3Q9NYG2 299 aa16.49■□□□□ 0.23
LAPTM4B-201ENST00000445593 SUCOQ9UBS9 1254 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms