RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 CCDC188H7C350 402 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 VAPBO95292 243 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 NMBRP28336 390 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 SEPHS1P49903 392 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 GFERP55789 205 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 CXADRP78310 365 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 FOXM1Q08050 763 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 THOC5Q13769 683 aaKnown RBP10.21□□□□□ -0.77
MCF2L-216ENST00000439475 MANEAQ5SRI9 462 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 RNF187Q5TA31 235 aaPredicted RBP10.21□□□□□ -0.77
MCF2L-216ENST00000439475 TTC23LQ6PF05 361 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 CCDC81Q6ZN84 652 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 FAM92BQ6ZTR7 304 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 SYDE1Q6ZW31 735 aaPredicted RBP10.21□□□□□ -0.77
MCF2L-216ENST00000439475 ZNF534Q76KX8 674 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 PDZD3Q86UT5 571 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 BPHLQ86WA6 291 aaPredicted RBP10.21□□□□□ -0.77
MCF2L-216ENST00000439475 LRRC6Q86X45 466 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 KMT5CQ86Y97 462 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 PPIL6Q8IXY8 311 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 ZSCAN1Q8NBB4 408 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 SPDYE1Q8NFV5 336 aaPredicted RBP10.21□□□□□ -0.77
MCF2L-216ENST00000439475 OR4E2Q8NGC2 313 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 GPR150Q8NGU9 434 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 GSDMBQ8TAX9 411 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 NAT14Q8WUY8 206 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 ASZ1Q8WWH4 475 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 LCN9Q8WX39 176 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 CPT1BQ92523 772 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 RSC1A1Q92681 617 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 MFSD3Q96ES6 412 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 CCNL2Q96S94 520 aaPredicted RBP10.21□□□□□ -0.77
MCF2L-216ENST00000439475 TCF12Q99081 682 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 OR52A5Q9H2C5 316 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 ZNF768Q9H5H4 540 aaKnown RBP10.21□□□□□ -0.77
MCF2L-216ENST00000439475 TREX1Q9NSU2 369 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 SYBUQ9NX95 663 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 OGFRQ9NZT2 677 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 ASIC3Q9UHC3 531 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 POLG2Q9UHN1 485 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 SLC24A2Q9UI40 661 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 GNPTGQ9UJJ9 305 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 VPS9D1Q9Y2B5 631 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 MRFAP1Q9Y605 127 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 PRSS21Q9Y6M0 314 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 TEX51A0A1B0GUA7 166 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 FAM237BA0A1B0GVD1 139 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 OR5K3A6NET4 321 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 USP27XA6NNY8 438 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 H3BMM5 538 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 SMAPO00193 183 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 NDC80O14777 642 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 OR1I1O60431 355 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 APC2O95996 2303 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 RPN2P04844 631 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 APOA4P06727 396 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 PDHA2P29803 388 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 LEPRP48357 1165 aaKnown RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 CRADDP78560 199 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 ACY1Q03154 408 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 VAC14Q08AM6 782 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 CLN3Q13286 438 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 BOP1Q14137 746 aaKnown RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 DHX34Q14147 1143 aaKnown RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 IL11RAQ14626 422 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 BRD3Q15059 726 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 TMED2Q15363 201 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 DNTTIP2Q5QJE6 756 aaKnown RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 TMTC4Q5T4D3 741 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 ANKS6Q68DC2 871 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 KIAA0930Q6ICG6 404 aaPredicted RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 DUS1LQ6P1R4 473 aaKnown RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 PRSS42Q7Z5A4 293 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 HOOK3Q86VS8 718 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 ZFAND4Q86XD8 727 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 LMNTD2Q8IXW0 634 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 TBC1D21Q8IYX1 336 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 CARFQ8N187 725 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 LILRA3Q8N6C8 439 aaPredicted RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 IL22RA1Q8N6P7 574 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 SIDT2Q8NBJ9 832 aaKnown RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 CALML6Q8TD86 181 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 KLHL6Q8WZ60 621 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 CAPZA3Q96KX2 299 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 RMDN2Q96LZ7 410 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 FCRL3Q96P31 734 aaPredicted RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 SERPINB12Q96P63 405 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 EFHD1Q9BUP0 239 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 DDX47Q9H0S4 455 aaKnown RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 TRIT1Q9H3H1 467 aaKnown RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 SRMSQ9H3Y6 488 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 TFB2MQ9H5Q4 396 aaKnown RBP10.2□□□□□ -0.78
MCF2L-216ENST00000439475 PRORYQ9H606 182 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 PDE7BQ9NP56 450 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 PCYOX1Q9UHG3 505 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 PYCARDQ9ULZ3 195 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 ASF1AQ9Y294 204 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 NEU2Q9Y3R4 380 aa10.2□□□□□ -0.78
MCF2L-216ENST00000439475 B3GALT1Q9Y5Z6 326 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms