RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 NAF1Q96HR8 494 aaKnown RBP15.87■□□□□ 0.13
SMPD4-207ENST00000435455 C9orf72Q96LT7 481 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 SERPINB12Q96P63 405 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 TGM7Q96PF1 710 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 TAAR9Q96RI9 348 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 MARCH4Q9P2E8 410 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-207ENST00000435455 KLHL3Q9UH77 587 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 SLC24A2Q9UI40 661 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 ZFHX4Q86UP3 3567 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 FAM237BA0A1B0GVD1 139 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 GOLGA8MH3BSY2 632 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 CCDC188H7C350 402 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 PRMT5O14744 637 aaPredicted RBP15.86■□□□□ 0.13
SMPD4-207ENST00000435455 PFDN6O15212 129 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 NDUFS3O75489 264 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 FGF3P11487 239 aaPredicted RBP15.86■□□□□ 0.13
SMPD4-207ENST00000435455 CD82P27701 267 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 ITPKBP27987 946 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 MAGEA3P43357 314 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 PREPP48147 710 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 RAB15P59190 212 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 SYTL3Q4VX76 610 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 BROXQ5VW32 411 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 DUS1LQ6P1R4 473 aaKnown RBP15.86■□□□□ 0.13
SMPD4-207ENST00000435455 C19orf48Q6RUI8 117 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 CES3Q6UWW8 571 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 PCGF5Q86SE9 256 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 SDCCAG8Q86SQ7 713 aaPredicted RBP15.86■□□□□ 0.13
SMPD4-207ENST00000435455 PDZD3Q86UT5 571 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 LRRC6Q86X45 466 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 FAM129CQ86XR2 697 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 SPACA3Q8IXA5 215 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 OTUD6BQ8N6M0 293 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 ACVR1CQ8NER5 493 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 TCF12Q99081 682 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 CARD6Q9BX69 1037 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 MVB12BQ9H7P6 319 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 SLC39A1Q9NY26 324 aa15.86■□□□□ 0.13
SMPD4-207ENST00000435455 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.86■□□□□ 0.13
SMPD4-207ENST00000435455 EFCAB7A8K855 629 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 DNALI1O14645 258 aaPredicted RBP15.85■□□□□ 0.13
SMPD4-207ENST00000435455 PRAMEF10O60809 474 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 RASSF9O75901 435 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 PDHA2P29803 388 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 UCNP55089 124 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 TLE3Q04726 772 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 BOP1Q14137 746 aaKnown RBP15.85■□□□□ 0.13
SMPD4-207ENST00000435455 COL28A1Q2UY09 1125 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 RNASEH2BQ5TBB1 312 aaKnown RBP15.85■□□□□ 0.13
SMPD4-207ENST00000435455 IRGCQ6NXR0 463 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 PRSS42Q7Z5A4 293 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 HOOK3Q86VS8 718 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 TFGQ92734 400 aaPredicted RBP15.85■□□□□ 0.13
SMPD4-207ENST00000435455 ART4Q93070 314 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 FERD3LQ96RJ6 166 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 DDA1Q9BW61 102 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 ASPSCR1Q9BZE9 553 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 OCIAD1Q9NX40 245 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 GNPTGQ9UJJ9 305 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 PCDHGA3Q9Y5H0 932 aa15.85■□□□□ 0.13
SMPD4-207ENST00000435455 SLC5A10A0PJK1 596 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 OR5K3A6NET4 321 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 C9orf172C9J069 976 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 KLK10O43240 276 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 RPS3P23396 243 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMPD4-207ENST00000435455 ARNTP27540 789 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 PTGIRP43119 386 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 LEPRP48357 1165 aaKnown RBP15.84■□□□□ 0.13
SMPD4-207ENST00000435455 ARCN1P48444 511 aaKnown RBP15.84■□□□□ 0.13
SMPD4-207ENST00000435455 DR1Q01658 176 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 MC2RQ01718 297 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 DHX34Q14147 1143 aaKnown RBP15.84■□□□□ 0.13
SMPD4-207ENST00000435455 BRD3Q15059 726 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 ANKRD20A4Q4UJ75 823 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 RNF187Q5TA31 235 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-207ENST00000435455 CACHD1Q5VU97 1274 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 PTRHD1Q6GMV3 140 aaKnown RBP15.84■□□□□ 0.13
SMPD4-207ENST00000435455 ARMC6Q6NXE6 501 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 LDB1Q86U70 411 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-207ENST00000435455 OOSP2Q86WS3 158 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 KLHL7Q8IXQ5 586 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 BMPERQ8N8U9 685 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 JPH3Q8WXH2 748 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-207ENST00000435455 ZNF669Q96BR6 464 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-207ENST00000435455 TEFMQ96QE5 360 aaKnown RBP15.84■□□□□ 0.13
SMPD4-207ENST00000435455 CD180Q99467 661 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 ZNF768Q9H5H4 540 aaKnown RBP15.84■□□□□ 0.13
SMPD4-207ENST00000435455 FBXO8Q9NRD0 319 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 LHX6Q9UPM6 363 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 VPS9D1Q9Y2B5 631 aa15.84■□□□□ 0.13
SMPD4-207ENST00000435455 UBA6A0AVT1 1052 aaPredicted RBP15.83■□□□□ 0.12
SMPD4-207ENST00000435455 LIPCP11150 499 aa15.83■□□□□ 0.12
SMPD4-207ENST00000435455 OGNP20774 298 aaKnown RBP15.83■□□□□ 0.12
SMPD4-207ENST00000435455 CASQ1P31415 396 aa15.83■□□□□ 0.12
SMPD4-207ENST00000435455 ETF1P62495 437 aaKnown RBP15.83■□□□□ 0.12
SMPD4-207ENST00000435455 TMED2Q15363 201 aa15.83■□□□□ 0.12
SMPD4-207ENST00000435455 TYSND1Q2T9J0 566 aa15.83■□□□□ 0.12
SMPD4-207ENST00000435455 DCAF12Q5T6F0 453 aa15.83■□□□□ 0.12
SMPD4-207ENST00000435455 IZUMO3Q5VZ72 239 aa15.83■□□□□ 0.12
SMPD4-207ENST00000435455 NEPROQ6NW34 567 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms