RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 PTPRCAPQ14761 206 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 SNAPC1Q16533 368 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 PDS5AQ29RF7 1337 aaKnown RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 TMEM266Q2M3C6 531 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 KRTAP13-3Q3SY46 172 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 CRY2Q49AN0 593 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 FAM98BQ52LJ0 330 aaKnown RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 PDLIM3Q53GG5 364 aaPredicted RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 PAPPA-AS1Q5QFB9 102 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 SPOUT1Q5T280 376 aaKnown RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 NDUFAF5Q5TEU4 345 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 ZNF280DQ6N043 979 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 KCTD8Q6ZWB6 473 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 ENOSF1Q7L5Y1 443 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 TRMT1LQ7Z2T5 733 aaKnown RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 LDB1Q86U70 411 aaPredicted RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 KBTBD6Q86V97 674 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 TMEM173Q86WV6 379 aaPredicted RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 NUDT13Q86X67 352 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 PRAG1Q86YV5 1406 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 ZNF34Q8IZ26 560 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 RYBPQ8N488 228 aaPredicted RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 LSMEM1Q8N8F7 131 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 L3MBTL4Q8NA19 623 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 NEXN-AS1Q8NBZ9 246 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 DMBX1Q8NFW5 382 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 SPATA22Q8NHS9 363 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 DUSP19Q8WTR2 217 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 SORCS1Q8WY21 1168 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 RND1Q92730 232 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 CD101Q93033 1021 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 HDAC11Q96DB2 347 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 TMCO6Q96DC7 493 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 LINGO1Q96FE5 620 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 CNDP2Q96KP4 475 aaKnown RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 DGAT2Q96PD7 388 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 RAB3IPQ96QF0 476 aaPredicted RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 SPAG5Q96R06 1193 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 CSF3RQ99062 836 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 BAG1Q99933 345 aaPredicted RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 LMF2Q9BU23 707 aaKnown RBP2.04□□□□□ -2.08
CDC40-204ENST00000431461 TXLNGYQ9BZA5 131 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 MIS12Q9H081 205 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 PDE7BQ9NP56 450 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 OLFML3Q9NRN5 406 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 FLRT3Q9NZU0 649 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 OSGIN1Q9UJX0 560 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 PCDHGA5Q9Y5G8 931 aa2.04□□□□□ -2.08
CDC40-204ENST00000431461 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 TRBC2A0A5B9 178 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 OR2M5A3KFT3 312 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 A8MV72 311 aaPredicted RBP2.03□□□□□ -2.08
CDC40-204ENST00000431461 ZNF587BE7ETH6 402 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 TMEM178BH3BS89 294 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 TMEM189-UBE2V1I3L0A0 370 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 J3QR06 171 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 TULP2O00295 520 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 AHCYL1O43865 530 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PCDH7O60245 1069 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 DKC1O60832 514 aaKnown RBP eCLIP2.03□□□□□ -2.08
CDC40-204ENST00000431461 ERAL1O75616 437 aaKnown RBP2.03□□□□□ -2.08
CDC40-204ENST00000431461 TFAP2AP05549 437 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PRSS1P07477 247 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 CCDC175P0C221 793 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PLA2G4BP0C869 781 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 SELLP14151 372 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 MYL6BP14649 208 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 ARCN1P48444 511 aaKnown RBP2.03□□□□□ -2.08
CDC40-204ENST00000431461 ASCL1P50553 236 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 RAB28P51157 221 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PDX1P52945 283 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 KRTAP10-8P60410 259 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 COG7P83436 770 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 SPOCK1Q08629 439 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 AIMP1Q12904 312 aaKnown RBP2.03□□□□□ -2.08
CDC40-204ENST00000431461 UBE2V1Q13404 147 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 ALCAMQ13740 583 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 BECN1Q14457 450 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 TWISTNBQ3B726 338 aaPredicted RBP2.03□□□□□ -2.08
CDC40-204ENST00000431461 SIRPB2Q5JXA9 342 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 SPECC1Q5M775 1068 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 SLC27A1Q6PCB7 646 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 C9orf139Q6ZV77 190 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 DET1Q7L5Y6 550 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PHLDB2Q86SQ0 1253 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 CEP57Q86XR8 500 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PTOV1Q86YD1 416 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 MFN1Q8IWA4 741 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 OR8H2Q8N162 312 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 GBGT1Q8N5D6 347 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 TDRD5Q8NAT2 981 aaKnown RBP2.03□□□□□ -2.08
CDC40-204ENST00000431461 ACVR1CQ8NER5 493 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 OR52I2Q8NH67 350 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 TBC1D16Q8TBP0 767 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 SLC20A1Q8WUM9 679 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PTERQ96BW5 349 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 RHBDF1Q96CC6 855 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 DUX3Q96PT4 197 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 GCNAQ96QF7 691 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 OR6C1Q96RD1 312 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms