RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 EDN1P05305 212 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 CRABP2P29373 138 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 CHI3L1P36222 383 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 IDH3AP50213 366 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 CDH13P55290 713 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 RPS21P63220 83 aaKnown RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 RFTN1Q14699 578 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 MYBPC3Q14896 1274 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 KIAA0319Q5VV43 1072 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 DCBLD2Q96PD2 775 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 QKIQ96PU8 341 aaKnown RBP eCLIP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 NPY6RQ99463 290 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 AGAP2Q99490 1192 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 NPAS2Q99743 824 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 LIN28AQ9H9Z2 209 aaKnown RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 TIMMDC1Q9NPL8 285 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 VTI1BQ9UEU0 232 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 CDV3Q9UKY7 258 aaKnown RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 RAP2CQ9Y3L5 183 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 IGLON5A6NGN9 336 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 TK2O00142 265 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 SEC22BO75396 215 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 RECQL5O94762 991 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 PKMP14618 531 aaKnown RBP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 CENPAP49450 140 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 ARHGDIAP52565 204 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 ELOCQ15369 112 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 TRIM61Q5EBN2 209 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 SCARA3Q6AZY7 606 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 ZFP1Q6P2D0 407 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 APCDD1Q8J025 514 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 ZCCHC10Q8TBK6 192 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 STAG3L4Q8TBR4 150 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 SCAMP4Q969E2 229 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 CFHR5Q9BXR6 569 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 SEMA4BQ9NPR2 832 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 LAMB1P07942 1786 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 POP7O75817 140 aaKnown RBP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 TFEBP19484 476 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 CAPZA2P47755 286 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 ZNF132P52740 706 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 HNRNPKP61978 463 aaKnown RBP eCLIP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 MGAT3Q09327 533 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 STX4Q12846 297 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 OLIG2Q13516 323 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 NR1D2Q14995 579 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 TBCELQ5QJ74 424 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 C11orf74Q86VG3 221 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 OR2T3Q8NH03 318 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 ADAMTS19Q8TE59 1207 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 IGSF8Q969P0 613 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 DACH2Q96NX9 599 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 NOL6Q9H6R4 1146 aaKnown RBP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 CROTQ9UKG9 612 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 POMPQ9Y244 141 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 DDX60LQ5H9U9 1706 aaKnown RBP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 WDR47O94967 919 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 PSMA4P25789 261 aaKnown RBP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 RING1Q06587 406 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 COL9A2Q14055 689 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 XKR4Q5GH76 650 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 GPR107Q5VW38 600 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 FSTL4Q6MZW2 842 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 KLHDC10Q6PID8 442 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 CERS6Q6ZMG9 384 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 LRRTM4Q86VH4 590 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 FAM156AQ8NDB6 213 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 RAD51AP1Q96B01 352 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 REPS1Q96D71 796 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 GATA5Q9BWX5 397 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 SCN7AQ01118 1682 aa10.49□□□□□ -0.73
TCOF1-204ENST00000427724 MYO18AQ92614 2054 aaKnown RBP10.49□□□□□ -0.73
TCOF1-204ENST00000427724 ABCA3Q99758 1704 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 BOLA2-SMG1P6H3BVE0 249 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 GUCY1B2O75343 617 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 MLNP12872 115 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 COX7A2P14406 83 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 ATP6V1E1P36543 226 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 NFYCQ13952 458 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 ZNF234Q14588 700 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 NDUFA9Q16795 377 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 ARL13AQ5H913 290 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-204ENST00000427724 SCIMPQ6UWF3 145 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 RBM12BQ8IXT5 1001 aaKnown RBP10.48□□□□□ -0.73
TCOF1-204ENST00000427724 KBTBD2Q8IY47 623 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 BRSK1Q8TDC3 778 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 STYXQ8WUJ0 223 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 EDAQ92838 391 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 UBE2E3Q969T4 207 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 RNF38Q9H0F5 515 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 VRTNQ9H8Y1 702 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 ATAD3AQ9NVI7 634 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 MFHAS1Q9Y4C4 1052 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 PEX12O00623 359 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 PRAMEF12O95522 483 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 DLGAP3O95886 979 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 ENO2P09104 434 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-204ENST00000427724 IL9P15248 144 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 ZNF23P17027 643 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms