RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 NEK10Q6ZWH5 1172 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 ULK2Q8IYT8 1036 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 CDYL2Q8N8U2 506 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 CXorf40AQ8TE69 158 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 FAM161BQ96MY7 647 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 RSPH9Q9H1X1 276 aaPredicted RBP25.98■■□□□ 1.75
LDB1-202ENST00000425280 IPPKQ9H8X2 491 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 PARVBQ9HBI1 364 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 MTCH2Q9Y6C9 303 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 SLCO2B1O94956 709 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 CHEK2O96017 543 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 DRD3P35462 400 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 DPTQ07507 201 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 CAMK2GQ13555 558 aaPredicted RBP25.97■■□□□ 1.75
LDB1-202ENST00000425280 PTK2BQ14289 1009 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 GRB7Q14451 532 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 RAET1GQ6H3X3 334 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 SMRP1Q8NCR6 262 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 ARL15Q9NXU5 204 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 OPTCQ9UBM4 332 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 XIRP2A4UGR9 3374 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 CKAP5Q14008 2032 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 A0A088AWK7 358 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 ANHXE9PGG2 379 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 GFYI3L273 518 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 MID1O15344 667 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 ATG13O75143 517 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 ANXA5P08758 320 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 KIR2DL1P43626 348 aaPredicted RBP25.97■■□□□ 1.75
LDB1-202ENST00000425280 GPR1P46091 355 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 ATP4BP51164 291 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 SEC13P55735 322 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 CDKL1Q00532 357 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 TRAF3Q13114 568 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 METTL2BQ6P1Q9 378 aaKnown RBP25.97■■□□□ 1.75
LDB1-202ENST00000425280 TMEM220Q6QAJ8 160 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 TRIM74Q86UV6 250 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 NLRP8Q86W28 1048 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 CACUL1Q86Y37 369 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 AADATQ8N5Z0 425 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 CSGALNACT1Q8TDX6 532 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 TUBGCP3Q96CW5 907 aa25.97■■□□□ 1.75
LDB1-202ENST00000425280 PSMD12O00232 456 aaPredicted RBP25.96■■□□□ 1.75
LDB1-202ENST00000425280 AIM2O14862 343 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 SLC16A5O15375 505 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 VPS4BO75351 444 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 OTCP00480 354 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 TIE1P35590 1138 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 SP140Q13342 867 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 CST6Q15828 149 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 XKR7Q5GH72 579 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 GK5Q6ZS86 529 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 OR4F6Q8NGB9 312 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 ATP6V1E2Q96A05 226 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 CCM2Q9BSQ5 444 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 FAM8A1Q9UBU6 413 aa25.96■■□□□ 1.75
LDB1-202ENST00000425280 K7EPI3 171 aa25.95■■□□□ 1.75
LDB1-202ENST00000425280 ARL1P40616 181 aaPredicted RBP25.95■■□□□ 1.75
LDB1-202ENST00000425280 FASTKQ14296 549 aaKnown RBP25.95■■□□□ 1.75
LDB1-202ENST00000425280 TCHHL1Q5QJ38 904 aaPredicted RBP25.95■■□□□ 1.75
LDB1-202ENST00000425280 DEFB107AQ8IZN7 70 aa25.95■■□□□ 1.75
LDB1-202ENST00000425280 WDR60Q8WVS4 1066 aa25.95■■□□□ 1.75
LDB1-202ENST00000425280 RCN3Q96D15 328 aa25.95■■□□□ 1.75
LDB1-202ENST00000425280 NECTIN4Q96NY8 510 aa25.95■■□□□ 1.75
LDB1-202ENST00000425280 TRIM54Q9BYV2 358 aa25.95■■□□□ 1.75
LDB1-202ENST00000425280 ANGPTL3Q9Y5C1 460 aa25.95■■□□□ 1.75
LDB1-202ENST00000425280 ENTPD5O75356 428 aa25.95■■□□□ 1.74
LDB1-202ENST00000425280 LBPP18428 481 aa25.95■■□□□ 1.74
LDB1-202ENST00000425280 CCNG1P51959 295 aa25.95■■□□□ 1.74
LDB1-202ENST00000425280 KPNB1Q14974 876 aaKnown RBP25.95■■□□□ 1.74
LDB1-202ENST00000425280 COL19A1Q14993 1142 aa25.95■■□□□ 1.74
LDB1-202ENST00000425280 C2orf27AQ580R0 203 aa25.95■■□□□ 1.74
LDB1-202ENST00000425280 SCIMPQ6UWF3 145 aa25.95■■□□□ 1.74
LDB1-202ENST00000425280 RASGRP3Q8IV61 690 aa25.95■■□□□ 1.74
LDB1-202ENST00000425280 EPHX3Q9H6B9 360 aa25.95■■□□□ 1.74
LDB1-202ENST00000425280 NPC1O15118 1278 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 STK16O75716 305 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 CAPN1P07384 714 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 NUDT2P50583 147 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 AAK1Q2M2I8 961 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 AGKQ53H12 422 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 AGBL4Q5VU57 503 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 METTL6Q8TCB7 284 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 SLC7A8Q9UHI5 535 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 RNASEH1O60930 286 aaKnown RBP25.94■■□□□ 1.74
LDB1-202ENST00000425280 PEX11AO75192 247 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 KATNA1O75449 491 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 PRR35P0CG20 571 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 HGFP14210 728 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 GGT5P36269 586 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 TAS2R38P59533 333 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 SYTL3Q4VX76 610 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 MILR1Q7Z6M3 343 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 ADGRG6Q86SQ4 1221 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 LILRA3Q8N6C8 439 aaPredicted RBP25.94■■□□□ 1.74
LDB1-202ENST00000425280 SNX31Q8N9S9 440 aa25.94■■□□□ 1.74
LDB1-202ENST00000425280 SLC5A10A0PJK1 596 aa25.93■■□□□ 1.74
LDB1-202ENST00000425280 HIST1H2AGP0C0S8 130 aaPredicted RBP25.93■■□□□ 1.74
LDB1-202ENST00000425280 HIST1H2ADP20671 130 aa25.93■■□□□ 1.74
LDB1-202ENST00000425280 CYP2A7P20853 494 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms