RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 FAM92AA1XBS5 289 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 CFAP99D6REC4 459 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 SCAMP3O14828 347 aaKnown RBP13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 VPS26AO75436 327 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 SLC2A4P14672 509 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 ZNF12P17014 697 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 TYMPP19971 482 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 HSPA7P48741 367 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 IFITM3Q01628 133 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 FPGSQ05932 587 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 PWP1Q13610 501 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 SGO1Q5FBB7 561 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 SPANXN4Q5MJ08 99 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 PERM1Q5SV97 790 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 CRTC3Q6UUV7 619 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 GTF2H4Q92759 462 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 RHBDF1Q96CC6 855 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 EID2BQ96D98 161 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 ELOVL2Q9NXB9 296 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 VNN3Q9NY84 501 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 PDE10AQ9Y233 779 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 CCL27Q9Y4X3 112 aa13.96□□□□□ -0.18
TPM3P9-201ENST00000424846 CHD5Q8TDI0 1954 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 SOBPA7XYQ1 873 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 GSTM2P28161 218 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 OR1G1P47890 313 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 TPD52P55327 224 aaPredicted RBP13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 SPRYD7Q5W111 196 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 LINGO4Q6UY18 593 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 PNPT1Q8TCS8 783 aaKnown RBP13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 LKAAEAR1Q8TD35 194 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 RAB2BQ8WUD1 216 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 TRUB1Q8WWH5 349 aaKnown RBP13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 CCDC90BQ9GZT6 254 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 RAD21L1Q9H4I0 556 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 GPN2Q9H9Y4 310 aaPredicted RBP13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 HPS4Q9NQG7 708 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 ZFP37Q9Y6Q3 630 aaPredicted RBP13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 AREL1O15033 823 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 TULP3O75386 442 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 IGLV3-27P01718 113 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 RAD23AP54725 363 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 PHEXP78562 749 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 TRAF3Q13114 568 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 SKIV2LQ15477 1246 aaKnown RBP13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 SBSNQ6UWP8 590 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 RSPO2Q6UXX9 243 aaPredicted RBP13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 TAS2R42Q7RTR8 314 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 RTN4RL1Q86UN2 441 aaPredicted RBP13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 TERB1Q8NA31 727 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 GIPC2Q8TF65 315 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 CNDP2Q96KP4 475 aaKnown RBP13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 FBXO44Q9H4M3 255 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 ACTR8Q9H981 624 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 COMMD8Q9NX08 183 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 HCSTQ9UBK5 93 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 SLC30A1Q9Y6M5 507 aa13.95□□□□□ -0.18
TPM3P9-201ENST00000424846 TMEM221A6NGB7 291 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 ARNTLO00327 626 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 HS6ST1O60243 411 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 CLCN7P51798 805 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 ISL1P61371 349 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 TAF1AQ15573 450 aaPredicted RBP13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 CTF1Q16619 201 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 VARS2Q5ST30 1063 aaKnown RBP13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 TXNDC11Q6PKC3 985 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 NECAB2Q7Z6G3 386 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 GALNT5Q7Z7M9 940 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 LEMD2Q8NC56 503 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 SLC47A1Q96FL8 570 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 BOCQ9BWV1 1114 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 IPPKQ9H8X2 491 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 E5RI56 91 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 INSIG1O15503 277 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 VNN2O95498 520 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 GSNP06396 782 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 CR2P20023 1033 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 PCMT1P22061 227 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 YBEYP58557 167 aaPredicted RBP13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 PHC1P78364 1004 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 KCNC4Q03721 635 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 GTF2H2Q13888 395 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 CLLU1OSQ5K130 101 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 ALG1LQ6GMV1 187 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 GTF2H2CQ6P1K8 395 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 SUSD1Q6UWL2 747 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 MILR1Q7Z6M3 343 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 ZNF598Q86UK7 904 aaKnown RBP13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 TMCO5AQ8N6Q1 288 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 SLC13A3Q8WWT9 602 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 HDAC2Q92769 488 aaKnown RBP13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 SH3YL1Q96HL8 342 aaPredicted RBP13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 C8orf48Q96LL4 319 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 PSKH2Q96QS6 385 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 SEPT5Q99719 369 aaPredicted RBP13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 CINPQ9BW66 212 aaPredicted RBP13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 TMEFF2Q9UIK5 374 aaPredicted RBP13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 GNPTGQ9UJJ9 305 aa13.94□□□□□ -0.18
TPM3P9-201ENST00000424846 RAI2Q9Y5P3 530 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms