RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 DPH1Q9BZG8 443 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 B3GNT4Q9C0J1 378 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 TREX1Q9NSU2 369 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 RNF14Q9UBS8 474 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 SOX13Q9UN79 622 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 PCDHB11Q9Y5F2 797 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 PRSS21Q9Y6M0 314 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.69□□□□□ -0.7
USP49-204ENST00000423567 ZNF106Q9H2Y7 1883 aaKnown RBP10.68□□□□□ -0.7
USP49-204ENST00000423567 USP24Q9UPU5 2620 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 PRAMEF33A0A0G2JMD5 474 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 EFCAB7A8K855 629 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 B4E171 279 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 GOLGA8MH3BSY2 632 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 CCDC188H7C350 402 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 PRMT5O14744 637 aaPredicted RBP10.68□□□□□ -0.7
USP49-204ENST00000423567 CAPN5O15484 640 aaPredicted RBP10.68□□□□□ -0.7
USP49-204ENST00000423567 KLK10O43240 276 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 KDM1AO60341 852 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 OR1I1O60431 355 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 AVILO75366 819 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 KRT37O76014 449 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 TMEM63AO94886 807 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 VAPBO95292 243 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 C9P02748 559 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 ANKRD34CP0C6C1 535 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 CCL4P13236 92 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 TSPAN7P41732 249 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 PREPP48147 710 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 UCNP55089 124 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 GFERP55789 205 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 PRKAA1Q13131 559 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 BOP1Q14137 746 aaKnown RBP10.68□□□□□ -0.7
USP49-204ENST00000423567 TMED2Q15363 201 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 KCTD19Q17RG1 926 aaPredicted RBP10.68□□□□□ -0.7
USP49-204ENST00000423567 RNF187Q5TA31 235 aaPredicted RBP10.68□□□□□ -0.7
USP49-204ENST00000423567 PTRHD1Q6GMV3 140 aaKnown RBP10.68□□□□□ -0.7
USP49-204ENST00000423567 CAPRIN2Q6IMN6 1127 aaKnown RBP10.68□□□□□ -0.7
USP49-204ENST00000423567 DUS1LQ6P1R4 473 aaKnown RBP10.68□□□□□ -0.7
USP49-204ENST00000423567 SYDE1Q6ZW31 735 aaPredicted RBP10.68□□□□□ -0.7
USP49-204ENST00000423567 MICALCLQ6ZW33 695 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 ARHGAP22Q7Z5H3 698 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 OOSP2Q86WS3 158 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 LRRC6Q86X45 466 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 SPACA3Q8IXA5 215 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 KLHL7Q8IXQ5 586 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 LILRA3Q8N6C8 439 aaPredicted RBP10.68□□□□□ -0.7
USP49-204ENST00000423567 GSDMBQ8TAX9 411 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 RSC1A1Q92681 617 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 MFSD3Q96ES6 412 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 C9orf72Q96LT7 481 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 SERPINB12Q96P63 405 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 PANX3Q96QZ0 392 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 OR52A5Q9H2C5 316 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 KIR3DX1Q9H7L2 352 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 MVB12BQ9H7P6 319 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 SLC39A1Q9NY26 324 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 EPHA6Q9UF33 1036 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 PCYOX1Q9UHG3 505 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 SLC24A2Q9UI40 661 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 GNPTGQ9UJJ9 305 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 NEU2Q9Y3R4 380 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 MAD1L1Q9Y6D9 718 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 APC2O95996 2303 aa10.68□□□□□ -0.7
USP49-204ENST00000423567 CACNA1BQ00975 2339 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 ACACAQ13085 2346 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 FAM237BA0A1B0GVD1 139 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 UBA6A0AVT1 1052 aaPredicted RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 PRAMEF10O60809 474 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 FGF3P11487 239 aaPredicted RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 ITPKBP27987 946 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 CASQ1P31415 396 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 ETV5P41161 510 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 ARL4DP49703 201 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 DR1Q01658 176 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 THOC5Q13769 683 aaKnown RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 PTK6Q13882 451 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 DHX34Q14147 1143 aaKnown RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 SEMA3AQ14563 771 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 BRD3Q15059 726 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 COL28A1Q2UY09 1125 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 DNAJC21Q5F1R6 531 aaKnown RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 DCAF12Q5T6F0 453 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 CACHD1Q5VU97 1274 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 KIAA0930Q6ICG6 404 aaPredicted RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 CYB5D1Q6P9G0 228 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 CES3Q6UWW8 571 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 CEACAM20Q6UY09 585 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 PRSS42Q7Z5A4 293 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 LDB1Q86U70 411 aaPredicted RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 PDZD3Q86UT5 571 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 CAND1Q86VP6 1230 aaKnown RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 CREG2Q8IUH2 290 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 NAT8LQ8N9F0 302 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 ACVR1CQ8NER5 493 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 ASZ1Q8WWH4 475 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 LCN9Q8WX39 176 aa10.67□□□□□ -0.7
USP49-204ENST00000423567 JPH3Q8WXH2 748 aaPredicted RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 TFGQ92734 400 aaPredicted RBP10.67□□□□□ -0.7
USP49-204ENST00000423567 SLCO2A1Q92959 643 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms