RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 SPNS2Q8IVW8 549 aa21.09■□□□□ 0.97
ABCF3-202ENST00000421340 PDXPQ96GD0 296 aa21.09■□□□□ 0.97
ABCF3-202ENST00000421340 ATOH8Q96SQ7 321 aa21.09■□□□□ 0.97
ABCF3-202ENST00000421340 SLC12A9Q9BXP2 914 aa21.09■□□□□ 0.97
ABCF3-202ENST00000421340 OR52A5Q9H2C5 316 aa21.09■□□□□ 0.97
ABCF3-202ENST00000421340 ALG9Q9H6U8 611 aa21.09■□□□□ 0.97
ABCF3-202ENST00000421340 RDH14Q9HBH5 336 aa21.09■□□□□ 0.97
ABCF3-202ENST00000421340 TM7SF3Q9NS93 570 aa21.09■□□□□ 0.97
ABCF3-202ENST00000421340 KLC4Q9NSK0 619 aa21.09■□□□□ 0.97
ABCF3-202ENST00000421340 COPG2Q9UBF2 871 aa21.09■□□□□ 0.97
ABCF3-202ENST00000421340 XPR1Q9UBH6 696 aa21.09■□□□□ 0.97
ABCF3-202ENST00000421340 G3V2L1 256 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 CDC7O00311 574 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 ACP5P13686 325 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 IDSP22304 550 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 ITPKAP23677 461 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 PDHA2P29803 388 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 MDH1P40925 334 aaKnown RBP21.08■□□□□ 0.97
ABCF3-202ENST00000421340 PREPP48147 710 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 KCNC1P48547 511 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 SERPINB4P48594 390 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 OR4D1Q15615 310 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 TSNQ15631 228 aaKnown RBP21.08■□□□□ 0.97
ABCF3-202ENST00000421340 CDKL4Q5MAI5 379 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 WASH2PQ6VEQ5 465 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 ZYG11AQ6WRX3 759 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 FAM83HQ6ZRV2 1179 aaPredicted RBP21.08■□□□□ 0.97
ABCF3-202ENST00000421340 ARMCX6Q7L4S7 300 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 HID1Q8IV36 788 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 LILRA3Q8N6C8 439 aaPredicted RBP21.08■□□□□ 0.97
ABCF3-202ENST00000421340 TTC28Q96AY4 2481 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 CCDC126Q96EE4 140 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 FOPNLQ96NB1 174 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 COL25A1Q9BXS0 654 aaPredicted RBP21.08■□□□□ 0.97
ABCF3-202ENST00000421340 WASH6PQ9NQA3 447 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 PILRBQ9UKJ0 227 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 IKZF3Q9UKT9 509 aa21.08■□□□□ 0.97
ABCF3-202ENST00000421340 PNMA8BQ9ULN7 279 aaPredicted RBP21.08■□□□□ 0.97
ABCF3-202ENST00000421340 DOCK9Q9BZ29 2069 aa21.08■□□□□ 0.96
ABCF3-202ENST00000421340 EML5Q05BV3 1969 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 POLR3GO15318 223 aaPredicted RBP21.07■□□□□ 0.96
ABCF3-202ENST00000421340 PSIP1O75475 530 aaKnown RBP21.07■□□□□ 0.96
ABCF3-202ENST00000421340 CSF2P04141 144 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 BPGMP07738 259 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 TPBGLP0DKB5 382 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 MYL2P10916 166 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 ATP5F1P24539 256 aaPredicted RBP21.07■□□□□ 0.96
ABCF3-202ENST00000421340 ACADLP28330 430 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 PRKAA2P54646 552 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 C21orf59P57076 290 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 PLA2G4EQ3MJ16 856 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 SBSNQ6UWP8 590 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 RABEPKQ7Z6M1 372 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 SPATS2Q86XZ4 545 aaKnown RBP21.07■□□□□ 0.96
ABCF3-202ENST00000421340 GPSM1Q86YR5 675 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 CCDC63Q8NA47 563 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 FBXO15Q8NCQ5 510 aaPredicted RBP21.07■□□□□ 0.96
ABCF3-202ENST00000421340 MGARPQ8TDB4 240 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 GPBAR1Q8TDU6 330 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 UNKQ9C0B0 810 aaKnown RBP21.07■□□□□ 0.96
ABCF3-202ENST00000421340 ERVMER34-1Q9H9K5 563 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 PARVBQ9HBI1 364 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 CPSF2Q9P2I0 782 aaKnown RBP21.07■□□□□ 0.96
ABCF3-202ENST00000421340 PCOLCE2Q9UKZ9 415 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 RNF112Q9ULX5 631 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 OARD1Q9Y530 152 aa21.07■□□□□ 0.96
ABCF3-202ENST00000421340 NPEPPSL1A6NEC2 478 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 FAM86C2PA6NEL3 165 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 TK2O00142 265 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 KLK8O60259 260 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 NME1P15531 152 aaKnown RBP21.06■□□□□ 0.96
ABCF3-202ENST00000421340 CDKL1Q00532 357 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 CTBSQ01459 385 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 SIM2Q14190 667 aaPredicted RBP21.06■□□□□ 0.96
ABCF3-202ENST00000421340 PPP1R3AQ16821 1122 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 CAPRIN2Q6IMN6 1127 aaKnown RBP21.06■□□□□ 0.96
ABCF3-202ENST00000421340 UNC5DQ6UXZ4 953 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 RD3Q7Z3Z2 195 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 PDZD3Q86UT5 571 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 SYT12Q8IV01 421 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 SLC22A9Q8IVM8 553 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 TRIM42Q8IWZ5 723 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 PHACTR4Q8IZ21 702 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 SDR16C5Q8N3Y7 309 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 RAB3IL1Q8TBN0 382 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 SREK1Q8WXA9 508 aaKnown RBP21.06■□□□□ 0.96
ABCF3-202ENST00000421340 TRIM54Q9BYV2 358 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 TMEM168Q9H0V1 697 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 OXSMQ9NWU1 459 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 SIRPGQ9P1W8 387 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 DNAJC16Q9Y2G8 782 aa21.06■□□□□ 0.96
ABCF3-202ENST00000421340 SMIM24O75264 130 aa21.05■□□□□ 0.96
ABCF3-202ENST00000421340 MTHFD2P13995 350 aa21.05■□□□□ 0.96
ABCF3-202ENST00000421340 CSNK1EP49674 416 aaKnown RBP21.05■□□□□ 0.96
ABCF3-202ENST00000421340 DNAJB13P59910 316 aa21.05■□□□□ 0.96
ABCF3-202ENST00000421340 IRX4P78413 519 aa21.05■□□□□ 0.96
ABCF3-202ENST00000421340 NFKB2Q00653 900 aa21.05■□□□□ 0.96
ABCF3-202ENST00000421340 ASPHQ12797 758 aa21.05■□□□□ 0.96
ABCF3-202ENST00000421340 ILF3Q12906 894 aaKnown RBP eCLIP21.05■□□□□ 0.96
ABCF3-202ENST00000421340 ABRQ12979 859 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms