RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 J3QKU1 62 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 SUN1O94901 812 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 FURINP09958 794 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 SLC35G4P0C7Q5 338 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 EBLN1P0CF75 366 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 RALBP11234 206 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 ETS1P14921 441 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 FOXN2P32314 431 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 GRIA1P42261 906 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 ARCN1P48444 511 aaKnown RBP10.75□□□□□ -0.69
SSBP3-206ENST00000420121 PLCL1Q15111 1095 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 CRTC2Q53ET0 693 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-206ENST00000420121 ZRANB3Q5FWF4 1079 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 PWWP2BQ6NUJ5 590 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 KLHL35Q6PF15 583 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 BORAQ6PGQ7 559 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 FBXO38Q6PIJ6 1188 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 C6orf15Q6UXA7 325 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-206ENST00000420121 SLC13A5Q86YT5 568 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-206ENST00000420121 TXLNBQ8N3L3 684 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 D2HGDHQ8N465 521 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 OR52K1Q8NGK4 314 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 OR13J1Q8NGT2 312 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 HEXDCQ8WVB3 486 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 C1orf54Q8WWF1 131 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 DCUN1D1Q96GG9 259 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 CD180Q99467 661 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 ARHGAP9Q9BRR9 750 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 ETNK1Q9HBU6 452 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 CROTQ9UKG9 612 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 GUCA1BQ9UMX6 200 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 CCDC88CQ9P219 2028 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 CCDC162PA2VCL2 907 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 CFAP99D6REC4 459 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 PSMD3O43242 534 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 PRKAR1AP10644 381 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 STIP1P31948 543 aaKnown RBP10.74□□□□□ -0.69
SSBP3-206ENST00000420121 PREPP48147 710 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 POLE2P56282 527 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 ACVR1Q04771 509 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 CACNG1Q06432 222 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 TUBB3Q13509 450 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 SEMA5AQ13591 1074 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 LAMB3Q13751 1172 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 SEPT6Q14141 434 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 CCDC38Q502W7 563 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 DNTTIP2Q5QJE6 756 aaKnown RBP10.74□□□□□ -0.69
SSBP3-206ENST00000420121 MEI1Q5TIA1 1274 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 PACS1Q6VY07 963 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 OOSP2Q86WS3 158 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 PPP1R3BQ86XI6 285 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 KMT5CQ86Y97 462 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 RASGRP3Q8IV61 690 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 SIDT2Q8NBJ9 832 aaKnown RBP10.74□□□□□ -0.69
SSBP3-206ENST00000420121 KIAA1143Q96AT1 154 aaPredicted RBP10.74□□□□□ -0.69
SSBP3-206ENST00000420121 ZNF501Q96CX3 271 aaPredicted RBP10.74□□□□□ -0.69
SSBP3-206ENST00000420121 ZNF778Q96MU6 729 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 CATSPER2Q96P56 530 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 RUFY1Q96T51 708 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 CCM2Q9BSQ5 444 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 EFHD1Q9BUP0 239 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 TWSG1Q9GZX9 223 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 SLC25A18Q9H1K4 315 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 ADNPQ9H2P0 1102 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 SLC2A6Q9UGQ3 507 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 LNPEPQ9UIQ6 1025 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 POMT2Q9UKY4 750 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 BTRCQ9Y297 605 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 PCSK5Q92824 1860 aa10.74□□□□□ -0.69
SSBP3-206ENST00000420121 ERI2A8K979 691 aaKnown RBP10.73□□□□□ -0.69
SSBP3-206ENST00000420121 BTN3A3O00478 584 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 BTN3A1O00481 513 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 SUV39H1O43463 412 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 SLC28A2O43868 658 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 PTMAP06454 111 aaKnown RBP10.73□□□□□ -0.69
SSBP3-206ENST00000420121 TPBGLP0DKB5 382 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 POLR2CP19387 275 aaPredicted RBP10.73□□□□□ -0.69
SSBP3-206ENST00000420121 MSNP26038 577 aaKnown RBP10.73□□□□□ -0.69
SSBP3-206ENST00000420121 NDUFS1P28331 727 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 DLSTP36957 453 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 FDFT1P37268 417 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 CD151P48509 253 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 CDH17Q12864 832 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 RPA4Q13156 261 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 KCNAB2Q13303 367 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 BOP1Q14137 746 aaKnown RBP10.73□□□□□ -0.69
SSBP3-206ENST00000420121 SEMA3AQ14563 771 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 ITIH4Q14624 930 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 GPR19Q15760 415 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 SEL1L2Q5TEA6 688 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 ZNF517Q6ZMY9 492 aaPredicted RBP10.73□□□□□ -0.69
SSBP3-206ENST00000420121 ZNF662Q6ZS27 426 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 ZNF534Q76KX8 674 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 TAS2R42Q7RTR8 314 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 LINC00523Q86TU6 105 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 CARFQ8N187 725 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 SLC38A9Q8NBW4 561 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 PHC3Q8NDX5 983 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 ACVR1CQ8NER5 493 aa10.73□□□□□ -0.69
SSBP3-206ENST00000420121 OR4E2Q8NGC2 313 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms