RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PCDHGA4Q9Y5G9 962 aa25.65■■□□□ 1.7
VEGFA-207ENST00000413642 ERVH48-1M5A8F1 160 aa25.64■■□□□ 1.7
VEGFA-207ENST00000413642 STK17BO94768 372 aa25.64■■□□□ 1.7
VEGFA-207ENST00000413642 ZNF28P17035 718 aa25.64■■□□□ 1.7
VEGFA-207ENST00000413642 ATP1A2P50993 1020 aa25.64■■□□□ 1.7
VEGFA-207ENST00000413642 KCNAB1Q14722 419 aa25.64■■□□□ 1.7
VEGFA-207ENST00000413642 PCID2Q5JVF3 399 aa25.64■■□□□ 1.7
VEGFA-207ENST00000413642 FBXO38Q6PIJ6 1188 aa25.64■■□□□ 1.7
VEGFA-207ENST00000413642 IL22RA1Q8N6P7 574 aa25.64■■□□□ 1.7
VEGFA-207ENST00000413642 PPHLN1Q8NEY8 458 aaKnown RBP25.64■■□□□ 1.7
VEGFA-207ENST00000413642 OR4L1Q8NH43 312 aa25.64■■□□□ 1.7
VEGFA-207ENST00000413642 TRMT1Q9NXH9 659 aaKnown RBP25.64■■□□□ 1.7
VEGFA-207ENST00000413642 COLEC10Q9Y6Z7 277 aa25.64■■□□□ 1.7
VEGFA-207ENST00000413642 SDK2Q58EX2 2172 aa25.63■■□□□ 1.69
VEGFA-207ENST00000413642 EIF4E1BA6NMX2 242 aaKnown RBP25.63■■□□□ 1.69
VEGFA-207ENST00000413642 LIFP15018 202 aa25.63■■□□□ 1.69
VEGFA-207ENST00000413642 NELFEP18615 380 aaKnown RBP25.63■■□□□ 1.69
VEGFA-207ENST00000413642 LAMB3Q13751 1172 aa25.63■■□□□ 1.69
VEGFA-207ENST00000413642 KLHL35Q6PF15 583 aa25.63■■□□□ 1.69
VEGFA-207ENST00000413642 C4orf22Q6V702 233 aa25.63■■□□□ 1.69
VEGFA-207ENST00000413642 PACS1Q6VY07 963 aa25.63■■□□□ 1.69
VEGFA-207ENST00000413642 UNC5BQ8IZJ1 945 aa25.63■■□□□ 1.69
VEGFA-207ENST00000413642 COG1Q8WTW3 980 aa25.63■■□□□ 1.69
VEGFA-207ENST00000413642 ZFPM2Q8WW38 1151 aa25.63■■□□□ 1.69
VEGFA-207ENST00000413642 VPS37BQ9H9H4 285 aa25.63■■□□□ 1.69
VEGFA-207ENST00000413642 HOMER3Q9NSC5 361 aa25.63■■□□□ 1.69
VEGFA-207ENST00000413642 MARCH4Q9P2E8 410 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-207ENST00000413642 ITGB6P18564 788 aa25.62■■□□□ 1.69
VEGFA-207ENST00000413642 POLR2CP19387 275 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-207ENST00000413642 MGAT1P26572 445 aa25.62■■□□□ 1.69
VEGFA-207ENST00000413642 NMBRP28336 390 aa25.62■■□□□ 1.69
VEGFA-207ENST00000413642 PRAMEP78395 509 aa25.62■■□□□ 1.69
VEGFA-207ENST00000413642 LY6DQ14210 128 aa25.62■■□□□ 1.69
VEGFA-207ENST00000413642 DNTTIP2Q5QJE6 756 aaKnown RBP25.62■■□□□ 1.69
VEGFA-207ENST00000413642 NLRP9Q7RTR0 991 aa25.62■■□□□ 1.69
VEGFA-207ENST00000413642 OOSP2Q86WS3 158 aa25.62■■□□□ 1.69
VEGFA-207ENST00000413642 ELMO1Q92556 727 aa25.62■■□□□ 1.69
VEGFA-207ENST00000413642 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.62■■□□□ 1.697e-6■■■■■ 27.5
VEGFA-207ENST00000413642 MAGOHBQ96A72 148 aaKnown RBP25.62■■□□□ 1.69
VEGFA-207ENST00000413642 PBKQ96KB5 322 aa25.62■■□□□ 1.69
VEGFA-207ENST00000413642 ZPBPQ9BS86 351 aa25.62■■□□□ 1.69
VEGFA-207ENST00000413642 SEMA5BQ9P283 1151 aa25.62■■□□□ 1.69
VEGFA-207ENST00000413642 C1QL1O75973 258 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 FOLR1P15328 257 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 NDUFS1P28331 727 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 KPNA2P52292 529 aaKnown RBP25.61■■□□□ 1.69
VEGFA-207ENST00000413642 PRKG2Q13237 762 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 COL9A2Q14055 689 aaPredicted RBP25.61■■□□□ 1.69
VEGFA-207ENST00000413642 FASTKD1Q53R41 847 aaKnown RBP25.61■■□□□ 1.69
VEGFA-207ENST00000413642 CES3Q6UWW8 571 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 NLGN4XQ8N0W4 816 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 ACVR1CQ8NER5 493 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 NLGN4YQ8NFZ3 816 aaPredicted RBP25.61■■□□□ 1.69
VEGFA-207ENST00000413642 SLC41A2Q96JW4 573 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 SEMA4CQ9C0C4 833 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 XKR8Q9H6D3 395 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 SYBUQ9NX95 663 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 TMEM184BQ9Y519 407 aaPredicted RBP25.61■■□□□ 1.69
VEGFA-207ENST00000413642 HEBP2Q9Y5Z4 205 aa25.61■■□□□ 1.69
VEGFA-207ENST00000413642 LOC400499M0QZD8 3231 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 LOC101059948A0A1B0GTJ6 334 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 IFRD1O00458 451 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-207ENST00000413642 BTN3A3O00478 584 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 DLGAP3O95886 979 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 KRT14P02533 472 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 CD151P48509 253 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 NPY2RP49146 381 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 GPS1Q13098 491 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 RPA4Q13156 261 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 BOP1Q14137 746 aaKnown RBP25.6■■□□□ 1.69
VEGFA-207ENST00000413642 ANKRD22Q5VYY1 191 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 ARMC6Q6NXE6 501 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 OR52E1Q8NGJ3 308 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 LKAAEAR1Q8TD35 194 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 LCN9Q8WX39 176 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 UBXN4Q92575 508 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 TFGQ92734 400 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-207ENST00000413642 HGH1Q9BTY7 390 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 TREX1Q9NSU2 369 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 BFARQ9NZS9 450 aa25.6■■□□□ 1.69
VEGFA-207ENST00000413642 UBA6A0AVT1 1052 aaPredicted RBP25.59■■□□□ 1.69
VEGFA-207ENST00000413642 IQCF5A8MTL0 148 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 BHMG1C9JSJ3 638 aaPredicted RBP25.59■■□□□ 1.69
VEGFA-207ENST00000413642 AVILO75366 819 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 TIAF1O95411 115 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 FTH1P02794 183 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 OR56A5P0C7T3 313 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 EBLN1P0CF75 366 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 TPSB2P20231 275 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 CSE1LP55060 971 aaKnown RBP25.59■■□□□ 1.69
VEGFA-207ENST00000413642 TPSAB1Q15661 275 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 LYPLAL1Q5VWZ2 237 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 SIDT2Q8NBJ9 832 aaKnown RBP25.59■■□□□ 1.69
VEGFA-207ENST00000413642 LSM14AQ8ND56 463 aaKnown RBP25.59■■□□□ 1.69
VEGFA-207ENST00000413642 ULBP3Q9BZM4 244 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 IL22Q9GZX6 179 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 SRMSQ9H3Y6 488 aa25.59■■□□□ 1.69
VEGFA-207ENST00000413642 MGAQ8IWI9 3026 aa25.58■■□□□ 1.69
VEGFA-207ENST00000413642 SLC5A10A0PJK1 596 aa25.58■■□□□ 1.69
VEGFA-207ENST00000413642 TLCD2A6NGC4 264 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms