RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 MATN2O00339 956 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 DDX3YO15523 660 aaKnown RBP11.81□□□□□ -0.52
LIMS2-210ENST00000413578 KRT1P04264 644 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 ST6GAL1P15907 406 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 PECAM1P16284 738 aaPredicted RBP11.81□□□□□ -0.52
LIMS2-210ENST00000413578 MSH3P20585 1137 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 NDUFS1P28331 727 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 PBLDP30039 288 aaPredicted RBP11.81□□□□□ -0.52
LIMS2-210ENST00000413578 NR2C2P49116 596 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 RRADP55042 308 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 DYNLT1P63172 113 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 PTPRCAPQ14761 206 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 NR6A1Q15406 480 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 PTCHD3Q3KNS1 767 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 PLEKHN1Q494U1 663 aaPredicted RBP11.81□□□□□ -0.52
LIMS2-210ENST00000413578 VWA5B1Q5TIE3 1220 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 IGFL3Q6UXB1 125 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 MFSD7Q6UXD7 560 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 DET1Q7L5Y6 550 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 GLT6D1Q7Z4J2 308 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 MRGPREQ86SM8 312 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 RFX6Q8HWS3 928 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 SLC25A41Q8N5S1 370 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 SLC35G2Q8TBE7 412 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 ZNF398Q8TD17 642 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 BLOC1S5Q8TDH9 187 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 CPLX3Q8WVH0 158 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 INPP5DQ92835 1189 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 RANBP9Q96S59 729 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 DPH2Q9BQC3 489 aaPredicted RBP11.81□□□□□ -0.52
LIMS2-210ENST00000413578 GORASP1Q9BQQ3 440 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 DHRS4Q9BTZ2 278 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 MAK16Q9BXY0 300 aaKnown RBP11.81□□□□□ -0.52
LIMS2-210ENST00000413578 ACTR5Q9H9F9 607 aaPredicted RBP11.81□□□□□ -0.52
LIMS2-210ENST00000413578 FANCEQ9HB96 536 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 ASF1BQ9NVP2 202 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 SAE1Q9UBE0 346 aaPredicted RBP11.81□□□□□ -0.52
LIMS2-210ENST00000413578 G3BP2Q9UN86 482 aaKnown RBP11.81□□□□□ -0.52
LIMS2-210ENST00000413578 SEC16AO15027 2179 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 CACNA1DQ01668 2161 aa11.81□□□□□ -0.52
LIMS2-210ENST00000413578 A6NL46 340 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 TMEM150CB9EJG8 249 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 BTN3A3O00478 584 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 PRAMEF1O95521 474 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 SLC35G4P0C7Q5 338 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 PYGMP11217 842 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 CDH3P22223 829 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 PRDX3P30048 256 aaKnown RBP11.8□□□□□ -0.52
LIMS2-210ENST00000413578 ARHGAP25P42331 645 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 CDKN2BP42772 138 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 PREPP48147 710 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 PRLHRP49683 370 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 XIAPP98170 497 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 ADCY2Q08462 1091 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 MPP3Q13368 585 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 ZRANB3Q5FWF4 1079 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 ARMC6Q6NXE6 501 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 SPOCD1Q6ZMY3 1216 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 DAAM2Q86T65 1068 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 IQCKQ8N0W5 287 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 ZNF567Q8N184 647 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 ACVR1CQ8NER5 493 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 OR4E2Q8NGC2 313 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 HM13Q8TCT9 377 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 TFB1MQ8WVM0 346 aaKnown RBP11.8□□□□□ -0.52
LIMS2-210ENST00000413578 RNF25Q96BH1 459 aaPredicted RBP11.8□□□□□ -0.52
LIMS2-210ENST00000413578 CLIP3Q96DZ5 547 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 TRAPPC9Q96Q05 1148 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 NRTNQ99748 197 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 OR52A5Q9H2C5 316 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 B3GNT3Q9Y2A9 372 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 PKP3Q9Y446 797 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 COLEC10Q9Y6Z7 277 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 SPTBP11277 2137 aa11.8□□□□□ -0.52
LIMS2-210ENST00000413578 GOLGA6L22H0YM25 854 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 BTN3A1O00481 513 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 SRP72O76094 671 aaKnown RBP11.79□□□□□ -0.52
LIMS2-210ENST00000413578 CYP2A7P20853 494 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 AKT1P31749 480 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 HADHAP40939 763 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 GABRA4P48169 554 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 LMAN1P49257 510 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 SOX8P57073 446 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 UBASH3AP57075 661 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 PRKAA1Q13131 559 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 MSLNQ13421 630 aaPredicted RBP11.79□□□□□ -0.52
LIMS2-210ENST00000413578 RAPSNQ13702 412 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 MYBPC3Q14896 1274 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 DCAF10Q5QP82 559 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 CDHR3Q6ZTQ4 885 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 BZW1Q7L1Q6 419 aaKnown RBP11.79□□□□□ -0.52
LIMS2-210ENST00000413578 RAB43Q86YS6 212 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 IPMKQ8NFU5 416 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 SGSM3Q96HU1 749 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 IP6K3Q96PC2 410 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 VAT1Q99536 393 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 CCM2Q9BSQ5 444 aa11.79□□□□□ -0.52
LIMS2-210ENST00000413578 TFB2MQ9H5Q4 396 aaKnown RBP11.79□□□□□ -0.52
LIMS2-210ENST00000413578 ZNF552Q9H707 407 aaPredicted RBP11.79□□□□□ -0.52
LIMS2-210ENST00000413578 SLC5A6Q9Y289 635 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms