RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 LINC00854A0A1B0GVQ3 168 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 WDR27A2RRH5 827 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 MTMR11A4FU01 709 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 PCDHGA12O60330 932 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 WBP4O75554 376 aaKnown RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 RPP40O75818 363 aaKnown RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 CRHBPP24387 322 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 HTR6P50406 440 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 HLCSP50747 726 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 TMPRSS3P57727 454 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 MYL7Q01449 175 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 PRKCEQ02156 737 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 MFSD13AQ14CX5 517 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 TEAD4Q15561 434 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 KIAA1211LQ6NV74 962 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 BRAT1Q6PJG6 821 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 FOXR2Q6PJQ5 311 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 IGF2-ASQ6U949 168 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 KCTD8Q6ZWB6 473 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 KDELC2Q7Z4H8 507 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 KATNAL2Q8IYT4 538 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 DTWD1Q8N5C7 304 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 ESX1Q8N693 406 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 DYNC2LI1Q8TCX1 351 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 CHURC1Q8WUH1 139 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 SLC7A3Q8WY07 619 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 PTERQ96BW5 349 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 SCYL1Q96KG9 808 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 RILPQ96NA2 401 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM175Q9BSA9 504 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 C1orf21Q9H246 121 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 PPIL3Q9H2H8 161 aaKnown RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 RNF146Q9NTX7 359 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM161AQ9NX61 479 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 NKIRAS1Q9NYS0 192 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 GMIPQ9P107 970 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 MARCH4Q9P2E8 410 aaPredicted RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 IFT80Q9P2H3 777 aaPredicted RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 FBXO5Q9UKT4 447 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 SRRM2Q9UQ35 2752 aaKnown RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 BTBD3Q9Y2F9 522 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 PRKAB1Q9Y478 270 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 C4orf47A7E2U8 309 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 RNF103O00237 685 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 GFRA2O00451 464 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 ZNF623O75123 536 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 NME6O75414 186 aaPredicted RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 TOM1L1O75674 476 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 TGDSO95455 350 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 ESRRBO95718 433 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 IGFBP1P08833 259 aaPredicted RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 LMO2P25791 158 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 CD79BP40259 229 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 CDKN1CP49918 316 aaPredicted RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 ARHGDIBP52566 201 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 DGKQP52824 942 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 SLC12A2P55011 1212 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 OCA2Q04671 838 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 NR1D2Q14995 579 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 RTP5Q14D33 572 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 PLPP4Q5VZY2 271 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 BTBD8Q5XKL5 378 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 KDM4DQ6B0I6 523 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 PAQR6Q6TCH4 344 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 NET1Q7Z628 596 aaPredicted RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 FAM124AQ86V42 546 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 NUDCD3Q8IVD9 361 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 LMNTD2Q8IXW0 634 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 RCOR2Q8IZ40 523 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 CPXCR1Q8N123 301 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 ELMOD1Q8N336 334 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 SIMC1Q8NDZ2 872 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 IL17RDQ8NFM7 739 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 LINC01599Q8WXQ3 324 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 NXNL1Q96CM4 212 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 ART5Q96L15 291 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 Q96MT0 163 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 SLC6A18Q96N87 628 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM79Q9BSE2 394 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 CISHQ9NSE2 258 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 MAT2BQ9NZL9 334 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 VAPAQ9P0L0 249 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 LRFN2Q9ULH4 789 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 PCDHB7Q9Y5E2 793 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 PNMA6FA0A0J9YX94 578 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 WDR64B1ANS9 1081 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 CCRL2O00421 344 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 CDX4O14627 284 aaPredicted RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 SLC28A2O43868 658 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 DDAH2O95865 285 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 CSF2P04141 144 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 ABHD2P08910 425 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 FAM157BP0CG42 384 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 IFI30P13284 250 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 GOT1P17174 413 aa3.07□□□□□ -1.92
RGPD3-202ENST00000409886 CTSOP43234 321 aaPredicted RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 ADARB1P78563 741 aaKnown RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 SETQ01105 290 aaPredicted RBP3.07□□□□□ -1.92
RGPD3-202ENST00000409886 SEMA5AQ13591 1074 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms