RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 SHC2P98077 582 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 KDSRQ06136 332 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 GIT2Q14161 759 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 HERC3Q15034 1050 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 TDRD12Q587J7 1177 aaKnown RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 C6orf136Q5SQH8 315 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 C9orf50Q5SZB4 431 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 RARS2Q5T160 578 aaKnown RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 ZNF648Q5T619 568 aaPredicted RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 NCAPH2Q6IBW4 605 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CLEC9AQ6UXN8 241 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 FAM214BQ7L5A3 538 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 STK32CQ86UX6 486 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 GSPT2Q8IYD1 628 aaKnown RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SLC35F6Q8N357 371 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 FAM86B1Q8N7N1 296 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 C12orf50Q8NA57 414 aaPredicted RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 OR52B4Q8NGK2 314 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 FIG4Q92562 907 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SGK3Q96BR1 496 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 VCX3BQ9H321 246 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 RNPEPL1Q9HAU8 725 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 ING3Q9NXR8 418 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SPG21Q9NZD8 308 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CNOT2Q9NZN8 540 aaKnown RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 PDP1Q9P0J1 537 aaPredicted RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 FRRS1LQ9P0K9 344 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 EBF1Q9UH73 591 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 BTBD3Q9Y2F9 522 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 RAD54BQ9Y620 910 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SPATA31A3Q5VYP0 1347 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 AGLP35573 1532 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 TRBV23OR9-2A0A075B6M9 112 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CYP3A7-CYP3A51PA0A087WV96 503 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 LOC100653049A0A140TA62 436 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 TCRBV5S2A0A599 114 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 TCRBV21S2A2A0A5A6 115 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 NPIPB5A8MRT5 1133 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 LCE2BO14633 110 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 OGTO15294 1046 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CLDN3O15551 220 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 RGS10O43665 173 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 KRT34O76011 436 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 MMP1P03956 469 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 YES1P07947 543 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SRPRAP08240 638 aaKnown RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 NFICP08651 508 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 RAP2AP10114 183 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CYP2D6P10635 497 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 ANXA7P20073 488 aaKnown RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 NR1D1P20393 614 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CYP3A7P24462 503 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 PSMB4P28070 264 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CCND2P30279 289 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SLC19A1P41440 591 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CNTN2Q02246 1040 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 ZP2Q05996 745 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SNAPC1Q16533 368 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 KYAT1Q16773 422 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 UGP2Q16851 508 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 EFHC1Q5JVL4 640 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 PRAMEF7Q5VXH5 474 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CD276Q5ZPR3 534 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 C17orf99Q6UX52 265 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 HAUS6Q7Z4H7 955 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SLC51AQ86UW1 340 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 NKAIN4Q8IVV8 208 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 ZBTB2Q8N680 514 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 ZNF596Q8TC21 504 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 UBLCP1Q8WVY7 318 aaPredicted RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 ASZ1Q8WWH4 475 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 RAB40AQ8WXH6 277 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 EDAQ92838 391 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SLC46A1Q96NT5 459 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CD180Q99467 661 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CCT7Q99832 543 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 RBM4BQ9BQ04 359 aaKnown RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SPATA5L1Q9BVQ7 753 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 RBM4Q9BWF3 364 aaKnown RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 HAPLN2Q9GZV7 340 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 ADNPQ9H2P0 1102 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SERHL2Q9H4I8 314 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 CXorf36Q9H7Y0 433 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 AKIRIN1Q9H9L7 192 aaPredicted RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 LMAN1LQ9HAT1 526 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 XPNPEP3Q9NQH7 507 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 PNPLA3Q9NST1 481 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SIDT1Q9NXL6 827 aaKnown RBP4.28□□□□□ -1.72
GTDC1-206ENST00000409214 BARHL2Q9NY43 387 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 RDH8Q9NYR8 311 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 HMGXB4Q9UGU5 601 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 TMEM59LQ9UK28 342 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 GAB2Q9UQC2 676 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 MFHAS1Q9Y4C4 1052 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 PCDHGB1Q9Y5G3 927 aa4.28□□□□□ -1.72
GTDC1-206ENST00000409214 SETD1AO15047 1707 aaKnown RBP4.27□□□□□ -1.73
GTDC1-206ENST00000409214 RGPD1P0DJD0 1748 aa4.27□□□□□ -1.73
GTDC1-206ENST00000409214 AKAP12Q02952 1782 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms