RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 ATP6V1G1O75348 118 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 ERN1O75460 977 aaKnown RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 CCNB2O95067 398 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 SAGP10523 405 aaPredicted RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 MNDAP41218 407 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 ZNF420Q8TAQ5 688 aaPredicted RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 HAVCR1Q96D42 359 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 GSDMCQ9BYG8 508 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 A0A1W2PRG6 482 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 MTPNP58546 118 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 TUBA1BP68363 451 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 PRR5P85299 388 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 HEPACAMQ14CZ8 416 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 ZBTB6Q15916 424 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 TMEM44Q2T9K0 475 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 MED27Q6P2C8 311 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 TUBA1AQ71U36 451 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 AHCYL2Q96HN2 611 aaKnown RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 IL1RAPQ9NPH3 570 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 RUVBL1Q9Y265 456 aaKnown RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 NOBOXO60393 691 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 CD36P16671 472 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 CDH4P55283 916 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 MVKQ03426 396 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 SERPINA13PQ6UXR4 307 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 USP30Q70CQ3 517 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 DNAJB7Q7Z6W7 309 aaPredicted RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 SRFBP1Q8NEF9 429 aaKnown RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 XAGE5Q8WWM1 108 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 RAD51AP1Q96B01 352 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 EHD1Q9H4M9 534 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 TMEM165Q9HC07 324 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 SCAMP3O14828 347 aaKnown RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 NPPAP01160 153 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 RLN1P04808 185 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 CORO1AP31146 461 aaKnown RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 SLC25A11Q02978 314 aaKnown RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 LBX2Q6XYB7 198 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 BEND5Q7L4P6 421 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 FCRL4Q96PJ5 515 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 ZNF214Q9UL59 606 aaPredicted RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 WDR37Q9Y2I8 494 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 PCDHGA11Q9Y5H2 935 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 BCAS2O75934 225 aaPredicted RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 CKMT2P17540 419 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 IFI44LQ53G44 452 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 OLFML2AQ68BL7 652 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 SKA1Q96BD8 255 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 CXorf40BQ96DE9 158 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 KNL1Q8NG31 2342 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 GTPBP1O00178 669 aaKnown RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 PLSCR1O15162 318 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 RPS14P62263 151 aaKnown RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 PUDPQ08623 228 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 NAE1Q13564 534 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 TARBP2Q15633 366 aaKnown RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 TMEM198Q66K66 360 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 CPNE9Q8IYJ1 553 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 SLC38A4Q969I6 547 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 HBEGFQ99075 208 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 AKTIPQ9H8T0 292 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 ABCB9Q9NP78 766 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 NME6O75414 186 aaPredicted RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 CTSEP14091 401 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 ALDH4A1P30038 563 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 ZNF829Q3KNS6 432 aaPredicted RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 SH3PXD2AQ5TCZ1 1133 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 CRYBG2Q8N1P7 616 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 NDOR1Q9UHB4 597 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 GRM6O15303 877 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 C22orf31O95567 290 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 TACR2P21452 398 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 PRKCHP24723 683 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 TPTEP56180 551 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 POM121L1PQ3SYA9 428 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 TMEM110Q86TL2 294 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 OR8H1Q8NGG4 311 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 ADAMTS15Q8TE58 950 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 TRIT1Q9H3H1 467 aaKnown RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 TMEM39AQ9NV64 488 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 FABP12A6NFH5 140 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 hCG_2039718K7EN88 272 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 DNAJA1P31689 397 aaKnown RBP13.16□□□□□ -0.3
SNED1-205ENST00000405547 BRCC3P46736 316 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 CLCNKBP51801 687 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 AP1S1P61966 158 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 OR6K2Q8NGY2 324 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 SIRPGQ9P1W8 387 aa13.16□□□□□ -0.3
SNED1-205ENST00000405547 RGS8P57771 180 aaPredicted RBP13.15□□□□□ -0.3
SNED1-205ENST00000405547 SMCO1Q147U7 214 aa13.15□□□□□ -0.3
SNED1-205ENST00000405547 KCNA10Q16322 511 aa13.15□□□□□ -0.3
SNED1-205ENST00000405547 PLEKHG4Q58EX7 1191 aa13.15□□□□□ -0.3
SNED1-205ENST00000405547 AURKBQ96GD4 344 aaPredicted RBP13.15□□□□□ -0.3
SNED1-205ENST00000405547 OR52B2Q96RD2 323 aa13.15□□□□□ -0.3
SNED1-205ENST00000405547 PKP2Q99959 881 aa13.15□□□□□ -0.3
SNED1-205ENST00000405547 CORO1BQ9BR76 489 aa13.15□□□□□ -0.3
SNED1-205ENST00000405547 GNAZP19086 355 aa13.15□□□□□ -0.3
SNED1-205ENST00000405547 CLK3P49761 638 aaKnown RBP13.15□□□□□ -0.3
SNED1-205ENST00000405547 TUBA3CQ13748 450 aa13.15□□□□□ -0.3
SNED1-205ENST00000405547 CPNE8Q86YQ8 564 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms