RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TRAF2Q12933 501 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 DUSP4Q13115 394 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 TOP3AQ13472 1001 aaPredicted RBP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 MAPKAPK3Q16644 382 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 CHST15Q7LFX5 561 aaPredicted RBP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF548Q8NEK5 533 aaPredicted RBP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 DDHD1Q8NEL9 900 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 PJA1Q8NG27 643 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 OVCA2Q8WZ82 227 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 FIG4Q92562 907 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 GTF2H4Q92759 462 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 SMIM14Q96QK8 99 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 OSBPL10Q9BXB5 764 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 MAGEE1Q9HCI5 957 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 FAM118AQ9NWS6 357 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 TMEM161AQ9NX61 479 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 ASIC5Q9NY37 505 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 VAPAQ9P0L0 249 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 ADGRE2Q9UHX3 823 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 OARD1Q9Y530 152 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 ELOVL7A1L3X0 281 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 IQCF5A8MTL0 148 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 MAGEB3O15480 346 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 ALDH2P05091 517 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 SLC2A4P14672 509 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 TCF3P15923 654 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 HMGCLP35914 325 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF157P51786 506 aaPredicted RBP10.55□□□□□ -0.72
CLIP4-204ENST00000404424 CYP4F3Q08477 520 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 ELAVL2Q12926 359 aaKnown RBP10.55□□□□□ -0.72
CLIP4-204ENST00000404424 CACHD1Q5VU97 1274 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 XAF1Q6GPH4 301 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 DUS1LQ6P1R4 473 aaKnown RBP10.55□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF783Q6ZMS7 281 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 DENND1CQ8IV53 801 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 GIPC3Q8TF64 312 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 SNX19Q92543 992 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 SLC47A1Q96FL8 570 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 PLEKHA8Q96JA3 519 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 GLT1D1Q96MS3 346 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 C19orf43Q9BQ61 176 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 THUMPD3Q9BV44 507 aaKnown RBP10.55□□□□□ -0.72
CLIP4-204ENST00000404424 FAM126AQ9BYI3 521 aaPredicted RBP10.55□□□□□ -0.72
CLIP4-204ENST00000404424 DPY30Q9C005 99 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 TOR3AQ9H497 397 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 PSME2Q9UL46 239 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 TMX2-CTNND1H3BSU7 103 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 FZD6O60353 706 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 DFNA5O60443 496 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 BCL10O95999 233 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 PCNAP12004 261 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 GNPDA1P46926 289 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 RPL38P63173 70 aaKnown RBP10.55□□□□□ -0.72
CLIP4-204ENST00000404424 PPP2R2BQ00005 443 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 INO80DQ53TQ3 878 aaPredicted RBP10.55□□□□□ -0.72
CLIP4-204ENST00000404424 C6orf141Q5SZD1 244 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 CST9Q5W186 159 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 PTRHD1Q6GMV3 140 aaKnown RBP10.55□□□□□ -0.72
CLIP4-204ENST00000404424 R3HCC1LQ7Z5L2 792 aaKnown RBP10.55□□□□□ -0.72
CLIP4-204ENST00000404424 ADHFE1Q8IWW8 467 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 OR10A6Q8NH74 314 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 SLC22A17Q8WUG5 538 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 ITFG2Q969R8 447 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 B3GALT6Q96L58 329 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 GPR63Q9BZJ6 419 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 CLPBQ9H078 707 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 ADNPQ9H2P0 1102 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 MAGIXQ9H6Y5 334 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 LIMD1Q9UGP4 676 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 GNPTGQ9UJJ9 305 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 C3orf18Q9UK00 162 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 PDE10AQ9Y233 779 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 FNDC3AQ9Y2H6 1198 aaKnown RBP10.55□□□□□ -0.72
CLIP4-204ENST00000404424 ANGPTL3Q9Y5C1 460 aa10.55□□□□□ -0.72
CLIP4-204ENST00000404424 GNGT2O14610 69 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 ARHGEF15O94989 841 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 RETP07949 1114 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 IMPDH2P12268 514 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF182P17025 639 aaPredicted RBP10.54□□□□□ -0.72
CLIP4-204ENST00000404424 IL1RNP18510 177 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 ATF6P18850 670 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 CD247P20963 164 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 UGT1A1P22309 533 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 UGT1A4P22310 534 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 DGKAP23743 735 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 UGT1A3P35503 534 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 UGT1A5P35504 534 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 TPD52P55327 224 aaPredicted RBP10.54□□□□□ -0.72
CLIP4-204ENST00000404424 ARF5P84085 180 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 BNIP3Q12983 259 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 C18orf21Q32NC0 220 aaPredicted RBP10.54□□□□□ -0.72
CLIP4-204ENST00000404424 RUNDC3AQ59EK9 446 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 HECTD3Q5T447 861 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 RNF219Q5W0B1 726 aaPredicted RBP10.54□□□□□ -0.72
CLIP4-204ENST00000404424 FUT10Q6P4F1 479 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 RSPO2Q6UXX9 243 aaPredicted RBP10.54□□□□□ -0.72
CLIP4-204ENST00000404424 ANKS3Q6ZW76 656 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 TRIM46Q7Z4K8 759 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 ABI1Q8IZP0 508 aa10.54□□□□□ -0.72
CLIP4-204ENST00000404424 SPARTQ8N0X7 666 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms