RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CCDC78A2IDD5 438 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 OR6C74A6NCV1 312 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 MROH6A6NGR9 719 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 PYCARD-AS1I3L0S3 204 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 LIASO43766 372 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 SPAG6O75602 509 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 DLSTP36957 453 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 ARCN1P48444 511 aaKnown RBP14.97□□□□□ -0.01
TPM1-207ENST00000403994 KPNA2P52292 529 aaKnown RBP14.97□□□□□ -0.01
TPM1-207ENST00000403994 CACNG1Q06432 222 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 KCNAB2Q13303 367 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 CRTC2Q53ET0 693 aaPredicted RBP14.97□□□□□ -0.01
TPM1-207ENST00000403994 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
TPM1-207ENST00000403994 STYXQ8WUJ0 223 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 CCM2Q9BSQ5 444 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 SLC25A18Q9H1K4 315 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 VPS37BQ9H9H4 285 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 PDE7BQ9NP56 450 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 HRASLS2Q9NWW9 162 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 RARRES3Q9UL19 164 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 PTPN13Q12923 2485 aa14.97□□□□□ -0.01
TPM1-207ENST00000403994 C17orf113A0A1B0GUU1 675 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 UBA6A0AVT1 1052 aaPredicted RBP14.96□□□□□ -0.01
TPM1-207ENST00000403994 ERI2A8K979 691 aaKnown RBP14.96□□□□□ -0.01
TPM1-207ENST00000403994 GOLGA6L6A8MZA4 724 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 PSMD3O43242 534 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 PSMA3P25788 255 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 NDUFS1P28331 727 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 CCR10P46092 362 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 PREPP48147 710 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 HSD11B2P80365 405 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 MC1RQ01726 317 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 GSE1Q14687 1217 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 CCDC38Q502W7 563 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 PWWP2BQ6NUJ5 590 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 TAS2R42Q7RTR8 314 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 LINC00523Q86TU6 105 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 CARFQ8N187 725 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 D2HGDHQ8N465 521 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 CLDN19Q8N6F1 224 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 ACVR1CQ8NER5 493 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 OR52K1Q8NGK4 314 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 CDKN2AIPNLQ96HQ2 116 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 PPM1MQ96MI6 270 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 FGF21Q9NSA1 209 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 TUBD1Q9UJT1 453 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 POMT2Q9UKY4 750 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 GUCA1BQ9UMX6 200 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 COLEC10Q9Y6Z7 277 aa14.96□□□□□ -0.01
TPM1-207ENST00000403994 OR51F1A6NGY5 319 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 KRT86O43790 486 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 AP2A2O94973 939 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 ZBTB11O95625 1053 aaPredicted RBP14.95□□□□□ -0.02
TPM1-207ENST00000403994 IFNB1P01574 187 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 POLR2CP19387 275 aaPredicted RBP14.95□□□□□ -0.02
TPM1-207ENST00000403994 TCN2P20062 427 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 MSNP26038 577 aaKnown RBP14.95□□□□□ -0.02
TPM1-207ENST00000403994 PDHA2P29803 388 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 FOXN2P32314 431 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 ARL4DP49703 201 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 TUBB4BP68371 445 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 ACY1Q03154 408 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 CDH17Q12864 832 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 TUBB2AQ13885 445 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 KRT33BQ14525 404 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 GPR19Q15760 415 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 ARMC6Q6NXE6 501 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 PACS1Q6VY07 963 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 SLC13A5Q86YT5 568 aaPredicted RBP14.95□□□□□ -0.02
TPM1-207ENST00000403994 OR13J1Q8NGT2 312 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 CT55Q8WUE5 264 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 LCN9Q8WX39 176 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 NRTNQ99748 197 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 HGH1Q9BTY7 390 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 TUBB2BQ9BVA1 445 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 FRMD8P1Q9BZ68 369 aaPredicted RBP14.95□□□□□ -0.02
TPM1-207ENST00000403994 BTRCQ9Y297 605 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 SNRNP200O75643 2136 aaKnown RBP14.95□□□□□ -0.02
TPM1-207ENST00000403994 SPTBP11277 2137 aa14.95□□□□□ -0.02
TPM1-207ENST00000403994 LRRK2Q5S007 2527 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 IFRD1O00458 451 aaPredicted RBP14.94□□□□□ -0.02
TPM1-207ENST00000403994 SUN1O94901 812 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 MT-ND3P03897 115 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 GSTM1P09488 218 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 FDFT1P37268 417 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 CD151P48509 253 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 GSDMDP57764 484 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 GSTM4Q03013 218 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 RPA4Q13156 261 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 DNASE1L3Q13609 305 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 DEFB109BQ30KR1 87 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 C16orf46Q6P387 395 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 FBXO38Q6PIJ6 1188 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 DNAAF3Q8N9W5 541 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 GLIS1Q8NBF1 620 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 OR4E2Q8NGC2 313 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 OR52E1Q8NGJ3 308 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 C1orf54Q8WWF1 131 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 FCRL4Q96PJ5 515 aa14.94□□□□□ -0.02
TPM1-207ENST00000403994 ALS2CR12Q96Q35 445 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms