RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 CENPUQ71F23 418 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 ARHGAP22Q7Z5H3 698 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 PDZD3Q86UT5 571 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 PLXDC1Q8IUK5 500 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 LMNTD2Q8IXW0 634 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 FBXO39Q8N4B4 442 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 LPGAT1Q92604 370 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 BIRC8Q96P09 236 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 ERP44Q9BS26 406 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 TSSK1BQ9BXA7 367 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 TRIM31Q9BZY9 425 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 RAB33BQ9H082 229 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 EPHA6Q9UF33 1036 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 SLC24A2Q9UI40 661 aa18.74■□□□□ 0.59
RTN4-207ENST00000402434 MN1Q10571 1320 aaPredicted RBP18.74■□□□□ 0.59
RTN4-207ENST00000402434 IQCF5A8MTL0 148 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 BHMG1C9JSJ3 638 aaPredicted RBP18.73■□□□□ 0.59
RTN4-207ENST00000402434 RAD51CO43502 376 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 TTC4O95801 387 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 C9P02748 559 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 ITGA2BP08514 1039 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 TYRP1P17643 537 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 AMD1P17707 334 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 MPSTP25325 297 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 ACADLP28330 430 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 CAPZBP47756 277 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 CBLBQ13191 982 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 IGDCC3Q8IVU1 814 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 OTUD6BQ8N6M0 293 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 RCBTB1Q8NDN9 531 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 TFGQ92734 400 aaPredicted RBP18.73■□□□□ 0.59
RTN4-207ENST00000402434 FGF11Q92914 225 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 LRRC39Q96DD0 335 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 TRIM44Q96DX7 344 aaPredicted RBP18.73■□□□□ 0.59
RTN4-207ENST00000402434 ZNF578Q96N58 590 aaPredicted RBP18.73■□□□□ 0.59
RTN4-207ENST00000402434 IL1RAPL1Q9NZN1 696 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 GNPTGQ9UJJ9 305 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 CDYLQ9Y232 598 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 SNX24Q9Y343 169 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 LOXL2Q9Y4K0 774 aa18.73■□□□□ 0.59
RTN4-207ENST00000402434 CDRT15L2A8MXV6 281 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 NDC80O14777 642 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 GPC4O75487 556 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 BANF1O75531 89 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 S1PR4O95977 384 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 AOAHP28039 575 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 PPM1FP49593 454 aaPredicted RBP18.72■□□□□ 0.59
RTN4-207ENST00000402434 MRPS25P82663 173 aaKnown RBP18.72■□□□□ 0.59
RTN4-207ENST00000402434 BOP1Q14137 746 aaKnown RBP18.72■□□□□ 0.59
RTN4-207ENST00000402434 BBS9Q3SYG4 887 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 ZNF470Q6ECI4 717 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 PTRHD1Q6GMV3 140 aaKnown RBP18.72■□□□□ 0.59
RTN4-207ENST00000402434 KLHL35Q6PF15 583 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 NAPRTQ6XQN6 538 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.72■□□□□ 0.593e-10■■■■■ 28.4
RTN4-207ENST00000402434 BBOF1Q8ND07 529 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 LKAAEAR1Q8TD35 194 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 ASZ1Q8WWH4 475 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 RSC1A1Q92681 617 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 PWWP2AQ96N64 755 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 MVB12BQ9H7P6 319 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 THSD1Q9NS62 852 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 C20orf96Q9NUD7 363 aaPredicted RBP18.72■□□□□ 0.59
RTN4-207ENST00000402434 INTS10Q9NVR2 710 aaKnown RBP18.72■□□□□ 0.59
RTN4-207ENST00000402434 AKAP7Q9P0M2 348 aaPredicted RBP18.72■□□□□ 0.59
RTN4-207ENST00000402434 VPS9D1Q9Y2B5 631 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 TEX264Q9Y6I9 313 aa18.72■□□□□ 0.59
RTN4-207ENST00000402434 KIF2AO00139 706 aaPredicted RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 CAPN5O15484 640 aaPredicted RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 TLX3O43711 291 aaPredicted RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 URI1O94763 535 aaPredicted RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 TNFSF15O95150 251 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 ESR1P03372 595 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 HGFP14210 728 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 ITGB6P18564 788 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 RBMS1P29558 406 aaKnown RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 CKAP4Q07065 602 aaKnown RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 THOC5Q13769 683 aaKnown RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 CRYMQ14894 314 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 BRD3Q15059 726 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 HIF1AQ16665 826 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 CTSL3PQ5NE16 218 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 DUPD1Q68J44 220 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 FOXR1Q6PIV2 292 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 CLEC14AQ86T13 490 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 SLC22A15Q8IZD6 547 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 KRT222Q8N1A0 295 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 AGBL5Q8NDL9 886 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 ACVR1CQ8NER5 493 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 SNIP1Q8TAD8 396 aaKnown RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 CALML6Q8TD86 181 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 PANX3Q96QZ0 392 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 ZMYND15Q9H091 742 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 PLAC1Q9HBJ0 212 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 WHRNQ9P202 907 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 CRYL1Q9Y2S2 319 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 AHCTF1Q8WYP5 2266 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 ZZEF1O43149 2961 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 UBA6A0AVT1 1052 aaPredicted RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 SRRM3A6NNA2 597 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms