RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 L1RE1Q9UN81 338 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 TNFRSF10BO14763 440 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 RAB39AQ14964 217 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 TOR1AIP1Q5JTV8 583 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 TMEM63BQ5T3F8 832 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 TXNDC8Q6A555 127 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 ZNF433Q8N7K0 673 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 CAVIN3Q969G5 261 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 NKD1Q969G9 470 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 ZSWIM3Q96MP5 696 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 NECTIN4Q96NY8 510 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 C3orf18Q9UK00 162 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 MGAT4AQ9UM21 535 aa11.9□□□□□ -0.5
CACNA1C-213ENST00000399629 NCANO14594 1321 aa11.9□□□□□ -0.51
CACNA1C-213ENST00000399629 LINGO3P0C6S8 592 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 COX4I1P13073 169 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CCNOP22674 350 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CLCNKAP51800 687 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 ERICH5Q6P6B1 374 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CUZD1Q86UP6 607 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 OR4C6Q8NH72 309 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 RASSF5Q8WWW0 418 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CCM2Q9BSQ5 444 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 MKKSQ9NPJ1 570 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 DHX15O43143 795 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CYP4B1P13584 511 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CDH13P55290 713 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 PSME3P61289 254 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 DMWDQ09019 674 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 PRRT3Q5FWE3 981 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CXorf57Q6NSI4 855 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 BBS12Q6ZW61 710 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 OR2L3Q8NG85 312 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 OR4E2Q8NGC2 313 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 KCNJ9Q92806 393 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 TRAF6Q9Y4K3 522 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 MROH2AA6NES4 1674 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 C9IYK1 514 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 SAP18O00422 153 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 TYRP1P17643 537 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CDKN1CP49918 316 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 GALK1P51570 392 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 GJA9P57773 515 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 DLG1Q12959 904 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 DLK2Q6UY11 383 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 ZSCAN5AQ9BUG6 496 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 A0A075B6Q4 140 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 ATP6AP2A0A1C7CYW4 349 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 COQ9O75208 318 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 ATP6AP2O75787 350 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 C4BPAP04003 597 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 LMO2P25791 158 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 L1CAMP32004 1257 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CCR10P46092 362 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 TAS2R40P59535 323 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 LPAL2Q16609 132 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 NRF1Q16656 503 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 ZNF852Q6ZMS4 543 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 VASH1Q7L8A9 365 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 SYVN1Q86TM6 617 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 SAPCD2Q86UD0 394 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 C12orf56Q8IXR9 622 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 ZNF611Q8N823 705 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 C1orf127Q8N9H9 656 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 KAT2AQ92830 837 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 TBATAQ96M53 351 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CPXM1Q96SM3 734 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 HSD17B14Q9BPX1 270 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 RHOJQ9H4E5 214 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CACNG4Q9UBN1 327 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 FBXW11Q9UKB1 542 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 INSL5Q9Y5Q6 135 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CASKO14936 926 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 SCTRP47872 440 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 ENPP2Q13822 863 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 DCST1Q5T197 706 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 ULK3Q6PHR2 472 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 ATXN2LQ8WWM7 1075 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 GPR174Q9BXC1 333 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 GABRQQ9UN88 632 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 TCAF1Q9Y4C2 921 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 G3V2T6 193 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 COL6A1P12109 1028 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 NOXRED1Q6NXP6 359 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 DHDDSQ86SQ9 333 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 CRYBG2Q8N1P7 616 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 PIWIL2Q8TC59 973 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 SLC38A4Q969I6 547 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 SUSD3Q96L08 255 aa11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 SMG9Q9H0W8 520 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 C8orf33Q9H7E9 229 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-213ENST00000399629 NPIPA5E9PKD4 350 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 TBX1O43435 398 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 UBOX5O94941 541 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 PAPSS2O95340 614 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 NR2F6P10588 404 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 RPS15P62841 145 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 HGSNATQ68CP4 663 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 CLEC4AQ9UMR7 237 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 NPIPA1Q9UND3 350 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms