RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 CSTF2P33240 577 aaKnown RBP eCLIP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PPARGP37231 505 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PCBP4P57723 403 aaKnown RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 DHX34Q14147 1143 aaKnown RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 KRT33BQ14525 404 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ANKRD20A4Q4UJ75 823 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 IZUMO3Q5VZ72 239 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 KIAA0930Q6ICG6 404 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CLEC14AQ86T13 490 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 FAM129CQ86XR2 697 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 KRT222Q8N1A0 295 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 AGBL5Q8NDL9 886 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 USP7Q93009 1102 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TMEM159Q96B96 161 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ZNF669Q96BR6 464 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 KRT12Q99456 494 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 KIR3DX1Q9H7L2 352 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 AKAP7Q9P0M2 348 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 RNF14Q9UBS8 474 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SLC24A2Q9UI40 661 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 RPS6KL1Q9Y6S9 549 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 NBEAQ8NFP9 2946 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MN1Q10571 1320 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ITPR1Q14643 2758 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ZCWPW2A0A1B0GU75 182 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 UBA6A0AVT1 1052 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MAGEB16A2A368 324 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CCDC188H7C350 402 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 IFRD1O00458 451 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PRMT5O14744 637 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 LIN7AO14910 233 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PRAMEF10O60809 474 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 NDUFS3O75489 264 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 C9P02748 559 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 RPA4Q13156 261 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PRKG2Q13237 762 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MSS51Q4VC12 460 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 IRGCQ6NXR0 463 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 FAM92BQ6ZTR7 304 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TMEM135Q86UB9 458 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ZNF248Q8NDW4 579 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TFGQ92734 400 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ART4Q93070 314 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CRELD1Q96HD1 420 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 C9orf72Q96LT7 481 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PWWP2AQ96N64 755 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 FERD3LQ96RJ6 166 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TRIM31Q9BZY9 425 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 P2RY12Q9H244 342 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 FOXJ2Q9P0K8 574 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 COLEC10Q9Y6Z7 277 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SLC5A10A0PJK1 596 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 EFCAB7A8K855 629 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 C9orf172C9J069 976 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 BHMG1C9JSJ3 638 aaPredicted RBP13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 RRP8O43159 456 aaKnown RBP13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 RASSF9O75901 435 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 GSTM1P09488 218 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MLLT3P42568 568 aaPredicted RBP13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CD151P48509 253 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SEPHS1P49903 392 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 EIF3BP55884 814 aaKnown RBP13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 GSTM4Q03013 218 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 HSPA14Q0VDF9 509 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SYTL3Q4VX76 610 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MRNIPQ6NTE8 343 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 NEPROQ6NW34 567 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ZNF449Q6P9G9 518 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SDCCAG8Q86SQ7 713 aaPredicted RBP13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PDZD3Q86UT5 571 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 VRK3Q8IV63 474 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SPACA3Q8IXA5 215 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 UNC5BQ8IZJ1 945 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 OR4E2Q8NGC2 313 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 RUNDC3BQ96NL0 473 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 BIRC8Q96P09 236 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CRYL1Q9Y2S2 319 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PCDHGA7Q9Y5G6 932 aa13.73□□□□□ -0.21
HLA-DQB1-202ENST00000399079 OR6C74A6NCV1 312 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 NVLO15381 856 aaKnown RBP13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PAMP19021 973 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ACADLP28330 430 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 FMO4P31512 558 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 DHX9Q08211 1270 aaKnown RBP13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TYSND1Q2T9J0 566 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 COL28A1Q2UY09 1125 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ZNF789Q5FWF6 425 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CTSL3PQ5NE16 218 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PTRHD1Q6GMV3 140 aaKnown RBP13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 LRRC69Q6ZNQ3 347 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SYDE1Q6ZW31 735 aaPredicted RBP13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CENPUQ71F23 418 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PCGF5Q86SE9 256 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 HOOK3Q86VS8 718 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CILP2Q8IUL8 1156 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 DENND6AQ8IWF6 608 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 BMPERQ8N8U9 685 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SPATA4Q8NEY3 305 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 OR5AR1Q8NGP9 310 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ZFPM2Q8WW38 1151 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms