RNA–Protein interactions for RNA: ENST00000397835.4

C5orf38-202, Transcript of chromosome 5 open reading frame 38, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C5orf38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf38-202ENST00000397835 C9orf172C9J069 976 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 PRMT5O14744 637 aaPredicted RBP23.09■■□□□ 1.29
C5orf38-202ENST00000397835 TTI1O43156 1089 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 ITPKBP27987 946 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 CASQ1P31415 396 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 CSTF2P33240 577 aaKnown RBP eCLIP23.09■■□□□ 1.29
C5orf38-202ENST00000397835 CD151P48509 253 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 PPP1CAP62136 330 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 BOP1Q14137 746 aaKnown RBP23.09■■□□□ 1.29
C5orf38-202ENST00000397835 PLCL1Q15111 1095 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 SYDE1Q6ZW31 735 aaPredicted RBP23.09■■□□□ 1.29
C5orf38-202ENST00000397835 TMEM135Q86UB9 458 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 PDZD3Q86UT5 571 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 OTUD6BQ8N6M0 293 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 HNRNPLLQ8WVV9 542 aaKnown RBP23.09■■□□□ 1.29
C5orf38-202ENST00000397835 ZFPM2Q8WW38 1151 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 PMEPA1Q969W9 287 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 C9orf72Q96LT7 481 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 HEBP2Q9Y5Z4 205 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 CELSR3Q9NYQ7 3312 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 ACACAQ13085 2346 aa23.09■■□□□ 1.29
C5orf38-202ENST00000397835 ZCWPW2A0A1B0GU75 182 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 MAGEB16A2A368 324 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 EFCAB7A8K855 629 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 IFRD1O00458 451 aaPredicted RBP23.08■■□□□ 1.29
C5orf38-202ENST00000397835 PRAMEF10O60809 474 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 CCR7P32248 378 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 DHX34Q14147 1143 aaKnown RBP23.08■■□□□ 1.29
C5orf38-202ENST00000397835 TYSND1Q2T9J0 566 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 C19orf48Q6RUI8 117 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 HOOK3Q86VS8 718 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 KRT222Q8N1A0 295 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 BMPERQ8N8U9 685 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 CARD6Q9BX69 1037 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 FOXJ2Q9P0K8 574 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 EPHA6Q9UF33 1036 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 MAD1L1Q9Y6D9 718 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 RPS6KL1Q9Y6S9 549 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 COLEC10Q9Y6Z7 277 aa23.08■■□□□ 1.29
C5orf38-202ENST00000397835 BHMG1C9JSJ3 638 aaPredicted RBP23.07■■□□□ 1.28
C5orf38-202ENST00000397835 NVLO15381 856 aaKnown RBP23.07■■□□□ 1.28
C5orf38-202ENST00000397835 RRP8O43159 456 aaKnown RBP23.07■■□□□ 1.28
C5orf38-202ENST00000397835 KIF1CO43896 1103 aaKnown RBP23.07■■□□□ 1.28
C5orf38-202ENST00000397835 NDUFS3O75489 264 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 ANKRD34CP0C6C1 535 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 PAMP19021 973 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 NDUFS1P28331 727 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 KRT33BQ14525 404 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 SYTL3Q4VX76 610 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 MRNIPQ6NTE8 343 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 ZNF449Q6P9G9 518 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 PCGF5Q86SE9 256 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 FAM129CQ86XR2 697 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 SPACA3Q8IXA5 215 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 PHC3Q8NDX5 983 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 TFGQ92734 400 aaPredicted RBP23.07■■□□□ 1.28
C5orf38-202ENST00000397835 FERD3LQ96RJ6 166 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 KRT12Q99456 494 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 NRTNQ99748 197 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 RAB33BQ9H082 229 aa23.07■■□□□ 1.28
C5orf38-202ENST00000397835 F8W8V4 182 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 BANF1O75531 89 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 RPS3P23396 243 aaKnown RBP eCLIP23.06■■□□□ 1.28
C5orf38-202ENST00000397835 ACADLP28330 430 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 CSE1LP55060 971 aaKnown RBP23.06■■□□□ 1.28
C5orf38-202ENST00000397835 MSS51Q4VC12 460 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 CTSL3PQ5NE16 218 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 NEPROQ6NW34 567 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 IRGCQ6NXR0 463 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 FAM92BQ6ZTR7 304 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 KCNE4Q8WWG9 221 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 LPGAT1Q92604 370 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 ART4Q93070 314 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 ACSL6Q9UKU0 697 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 CDYLQ9Y232 598 aa23.06■■□□□ 1.28
C5orf38-202ENST00000397835 URB1O60287 2271 aaKnown RBP23.06■■□□□ 1.28
C5orf38-202ENST00000397835 ANKRD11Q6UB99 2663 aaPredicted RBP23.05■■□□□ 1.28
C5orf38-202ENST00000397835 UBA6A0AVT1 1052 aaPredicted RBP23.05■■□□□ 1.28
C5orf38-202ENST00000397835 OR5K3A6NET4 321 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 B4E171 279 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 USP1O94782 785 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 OGNP20774 298 aaKnown RBP23.05■■□□□ 1.28
C5orf38-202ENST00000397835 TSPAN7P41732 249 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 EIF3BP55884 814 aaKnown RBP23.05■■□□□ 1.28
C5orf38-202ENST00000397835 DHX9Q08211 1270 aaKnown RBP23.05■■□□□ 1.28
C5orf38-202ENST00000397835 COL28A1Q2UY09 1125 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 PTRHD1Q6GMV3 140 aaKnown RBP23.05■■□□□ 1.28
C5orf38-202ENST00000397835 KLHL35Q6PF15 583 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 LRRC69Q6ZNQ3 347 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 CENPUQ71F23 418 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 PRSS42Q7Z5A4 293 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 SDCCAG8Q86SQ7 713 aaPredicted RBP23.05■■□□□ 1.28
C5orf38-202ENST00000397835 LRRC6Q86X45 466 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 VRK3Q8IV63 474 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 ACVR1CQ8NER5 493 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 STAMBPL1Q96FJ0 436 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 ZDHHC12Q96GR4 267 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 CRELD1Q96HD1 420 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 PWWP2AQ96N64 755 aa23.05■■□□□ 1.28
C5orf38-202ENST00000397835 BIRC8Q96P09 236 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms