RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SLC13A5Q86YT5 568 aaPredicted RBP17.83■□□□□ 0.44
FXN-203ENST00000396366 GLIS1Q8NBF1 620 aa17.83■□□□□ 0.44
FXN-203ENST00000396366 SIDT2Q8NBJ9 832 aaKnown RBP17.83■□□□□ 0.44
FXN-203ENST00000396366 HM13Q8TCT9 377 aa17.83■□□□□ 0.44
FXN-203ENST00000396366 STYXQ8WUJ0 223 aa17.83■□□□□ 0.44
FXN-203ENST00000396366 ZFPM2Q8WW38 1151 aa17.83■□□□□ 0.44
FXN-203ENST00000396366 STARD8Q92502 1023 aa17.83■□□□□ 0.44
FXN-203ENST00000396366 FERD3LQ96RJ6 166 aa17.83■□□□□ 0.44
FXN-203ENST00000396366 FAM117AQ9C073 453 aa17.83■□□□□ 0.44
FXN-203ENST00000396366 OR52A5Q9H2C5 316 aa17.83■□□□□ 0.44
FXN-203ENST00000396366 COG4Q9H9E3 785 aa17.83■□□□□ 0.44
FXN-203ENST00000396366 GEMIN8Q9NWZ8 242 aaKnown RBP17.83■□□□□ 0.44
FXN-203ENST00000396366 COLEC10Q9Y6Z7 277 aa17.83■□□□□ 0.44
FXN-203ENST00000396366 PIKFYVEQ9Y2I7 2098 aa17.83■□□□□ 0.44
FXN-203ENST00000396366 C17orf113A0A1B0GUU1 675 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 UBA6A0AVT1 1052 aaPredicted RBP17.82■□□□□ 0.44
FXN-203ENST00000396366 CCDC162PA2VCL2 907 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 KLHL33A6NCF5 533 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 TERTO14746 1132 aaKnown RBP17.82■□□□□ 0.44
FXN-203ENST00000396366 IFNB1P01574 187 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 CACNG1Q06432 222 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 GPR19Q15760 415 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 KCTD19Q17RG1 926 aaPredicted RBP17.82■□□□□ 0.44
FXN-203ENST00000396366 DEFB109BQ30KR1 87 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.82■□□□□ 0.44
FXN-203ENST00000396366 SEL1L2Q5TEA6 688 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 OOSP2Q86WS3 158 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 HEXDCQ8WVB3 486 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 STAMBPL1Q96FJ0 436 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 PDE7BQ9NP56 450 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 SMARCAL1Q9NZC9 954 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 SLC2A6Q9UGQ3 507 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 RARRES3Q9UL19 164 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 ZNF148Q9UQR1 794 aa17.82■□□□□ 0.44
FXN-203ENST00000396366 SETXQ7Z333 2677 aaKnown RBP17.81■□□□□ 0.44
FXN-203ENST00000396366 GOLGA6L3A6NEY3 463 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 TLCD2A6NGC4 264 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 BTN3A3O00478 584 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 KATNA1O75449 491 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 NTRK1P04629 796 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 FURINP09958 794 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 TCN2P20062 427 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 PSMA3P25788 255 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 STIP1P31948 543 aaKnown RBP17.81■□□□□ 0.44
FXN-203ENST00000396366 CCR10P46092 362 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 ARL4DP49703 201 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 HSD11B2P80365 405 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 MEI1Q5TIA1 1274 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 ARMC6Q6NXE6 501 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 FAM199XQ6PEV8 388 aaPredicted RBP17.81■□□□□ 0.44
FXN-203ENST00000396366 NAPRTQ6XQN6 538 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 DNAAF3Q8N9W5 541 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 ZNF778Q96MU6 729 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 RUFY1Q96T51 708 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 EFHD1Q9BUP0 239 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 FGF21Q9NSA1 209 aa17.81■□□□□ 0.44
FXN-203ENST00000396366 SLC9B1P1A6NJY1 282 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 KRT86O43790 486 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 ZSCAN5DPP0CG00 497 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 MSNP26038 577 aaKnown RBP17.8■□□□□ 0.44
FXN-203ENST00000396366 PRKG2Q13237 762 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 KCNAB2Q13303 367 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 BRD3Q15059 726 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 SIX1Q15475 284 aaPredicted RBP17.8■□□□□ 0.44
FXN-203ENST00000396366 SKIDA1Q1XH10 827 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 LINC00523Q86TU6 105 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 D2HGDHQ8N465 521 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 ACVR1CQ8NER5 493 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 OR13J1Q8NGT2 312 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 CT55Q8WUE5 264 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 LCN9Q8WX39 176 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 ALS2CR12Q96Q35 445 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 CD180Q99467 661 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 TSGA10Q9BZW7 698 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 TRIM4Q9C037 500 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 SLC25A18Q9H1K4 315 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 XKR8Q9H6D3 395 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 PADI1Q9ULC6 663 aa17.8■□□□□ 0.44
FXN-203ENST00000396366 HEMK1Q9Y5R4 338 aaPredicted RBP17.8■□□□□ 0.44
FXN-203ENST00000396366 OR1I1O60431 355 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 SUN1O94901 812 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 CCNYL3P0C7X3 344 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 SFTPCP11686 197 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 NDUFS1P28331 727 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 FOXN2P32314 431 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 LMAN1P49257 510 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 ACY1Q03154 408 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 CDH17Q12864 832 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 ERV3-1Q14264 604 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 RPS6KA1Q15418 735 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 PRAMEF17Q5VTA0 474 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 PPP1R21Q6ZMI0 780 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 TMEM135Q86UB9 458 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 PTRH1Q86Y79 214 aaKnown RBP17.79■□□□□ 0.44
FXN-203ENST00000396366 KMT5CQ86Y97 462 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 OR52E1Q8NGJ3 308 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 HDAC10Q969S8 669 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 ZNF501Q96CX3 271 aaPredicted RBP17.79■□□□□ 0.44
FXN-203ENST00000396366 CATSPER2Q96P56 530 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 KLHL25Q9H0H3 589 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms