RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 KIR3DX1Q9H7L2 352 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 LRRC40Q9H9A6 602 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 COG4Q9H9E3 785 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 ANKMY1Q9P2S6 941 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 CRLS1Q9UJA2 301 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 NAV2Q8IVL1 2488 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 OR6C74A6NCV1 312 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 BHMG1C9JSJ3 638 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-205ENST00000394892 K7EM74 188 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 HCRTR1O43613 425 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 RASSF9O75901 435 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 STK10O94804 968 aaKnown RBP8.62□□□□□ -1.03
ATG4A-205ENST00000394892 KIAA0754O94854 1291 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 PRKAR1AP10644 381 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 POLR2CP19387 275 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-205ENST00000394892 ITGALP20701 1170 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 MAP4P27816 1152 aaKnown RBP8.62□□□□□ -1.03
ATG4A-205ENST00000394892 ACADLP28330 430 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 RPL22P35268 128 aaKnown RBP8.62□□□□□ -1.03
ATG4A-205ENST00000394892 CETN2P41208 172 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 HALP42357 657 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 TNNT3P45378 269 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-205ENST00000394892 CCR10P46092 362 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 ACVR1Q04771 509 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 ABHD18Q0P651 414 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 KCNAB2Q13303 367 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 SEMA5AQ13591 1074 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 SEPT6Q14141 434 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 P3H1Q32P28 736 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 GPR33Q49SQ1 333 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 ZRANB3Q5FWF4 1079 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 ZNF789Q5FWF6 425 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 TMEM135Q86UB9 458 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 D2HGDHQ8N465 521 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 LMNTD1Q8N9Z9 388 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 LKAAEAR1Q8TD35 194 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 STYXQ8WUJ0 223 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 ULK4Q96C45 1275 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 ZDHHC12Q96GR4 267 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 CATSPER2Q96P56 530 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 ZPBPQ9BS86 351 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 XKR8Q9H6D3 395 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 CASS4Q9NQ75 786 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 HRASLS2Q9NWW9 162 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 MARCH4Q9P2E8 410 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-205ENST00000394892 FEZ2Q9UHY8 353 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-205ENST00000394892 TUBD1Q9UJT1 453 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 ACSL5Q9ULC5 683 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 RPS6KL1Q9Y6S9 549 aa8.62□□□□□ -1.03
ATG4A-205ENST00000394892 C17orf113A0A1B0GUU1 675 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 TCRBV7S3A2A0A539 114 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 SLC5A10A0PJK1 596 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 GOLGA6L9A6NEM1 432 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 GOT2P00505 430 aaKnown RBP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 IFNB1P01574 187 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 CTSBP07858 339 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 GP1BBP13224 206 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 PVRP15151 417 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 MSNP26038 577 aaKnown RBP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 STIP1P31948 543 aaKnown RBP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 HADHAP40939 763 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 KCNJ1P48048 391 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 CACNG1Q06432 222 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 BOP1Q14137 746 aaKnown RBP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 MAP7Q14244 749 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 IL11RAQ14626 422 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 GPR19Q15760 415 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 ZIC1Q15915 447 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 TSTD2Q5T7W7 516 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 FAM199XQ6PEV8 388 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 C6orf15Q6UXA7 325 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 ZNF662Q6ZS27 426 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 TAS2R42Q7RTR8 314 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 LDB1Q86U70 411 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 PTRH1Q86Y79 214 aaKnown RBP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 VRK3Q8IV63 474 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 TMEM151BQ8IW70 566 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 ADGRF3Q8IZF5 1079 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 OR4E2Q8NGC2 313 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 FLVCR1-AS1Q8TAF5 88 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 HDAC10Q969S8 669 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 KIAA1143Q96AT1 154 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 ZNF501Q96CX3 271 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 DCUN1D1Q96GG9 259 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 CCM2Q9BSQ5 444 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 ULBP3Q9BZM4 244 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 GPN2Q9H9Y4 310 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-205ENST00000394892 SMARCAL1Q9NZC9 954 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 ANAPC2Q9UJX6 822 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 CROTQ9UKG9 612 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 POMT2Q9UKY4 750 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 CDYLQ9Y232 598 aa8.61□□□□□ -1.03
ATG4A-205ENST00000394892 TLCD2A6NGC4 264 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 SLC9B1P1A6NJY1 282 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 ZNF891A8MT65 544 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-205ENST00000394892 H3BMH7 237 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 BTN3A1O00481 513 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 CAPN1P07384 714 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 SLC35G4P0C7Q5 338 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms