RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 PARGQ86W56 976 aa13.82□□□□□ -0.2
HERPUD1-203ENST00000379792 DCP2Q8IU60 420 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-203ENST00000379792 CFAP61Q8NHU2 1237 aa13.82□□□□□ -0.2
HERPUD1-203ENST00000379792 PKNOX2Q96KN3 472 aa13.82□□□□□ -0.2
HERPUD1-203ENST00000379792 DERL2Q9GZP9 239 aa13.82□□□□□ -0.2
HERPUD1-203ENST00000379792 NMRAL1Q9HBL8 299 aa13.82□□□□□ -0.2
HERPUD1-203ENST00000379792 SSU72Q9NP77 194 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-203ENST00000379792 FSCN3Q9NQT6 498 aa13.82□□□□□ -0.2
HERPUD1-203ENST00000379792 SMG5Q9UPR3 1016 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-203ENST00000379792 USP34Q70CQ2 3546 aa13.82□□□□□ -0.2
HERPUD1-203ENST00000379792 A0A1B0GTW7 788 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 LIN7AO14910 233 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 PRPF4O43172 522 aaKnown RBP eCLIP13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 SNX2O60749 519 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 CELA2BP08218 269 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 GNSP15586 552 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 SLC26A3P40879 764 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 C1orf61Q13536 156 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 OR4D1Q15615 310 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 TSNQ15631 228 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 METRNLQ641Q3 311 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 LRRC8EQ6NSJ5 796 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 SLC30A9Q6PML9 568 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 ISCA2Q86U28 154 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 PHACTR4Q8IZ21 702 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 MYO1HQ8N1T3 1032 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 FSTL5Q8N475 847 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 ARMC2Q8NEN0 867 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 TIMM29Q9BSF4 260 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 MKS1Q9NXB0 559 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 ADAMTS6Q9UKP5 1117 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 DGKBQ9Y6T7 804 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 SPAG17Q6Q759 2223 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 H3BM21 787 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 TK2O00142 265 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 POLR3GO15318 223 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 PLIN3O60664 434 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 PROCP04070 461 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 GSTA1P08263 222 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 GSTM1P09488 218 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 CBSLP0DN79 551 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 JUNDP17535 347 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 VCLP18206 1134 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 CBSP35520 551 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 GYS2P54840 703 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 BNC1Q01954 994 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 GSTM4Q03013 218 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 TEAD4Q15561 434 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 TSNAXIP1Q2TAA8 658 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 KIF19Q2TAC6 998 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 KLC3Q6P597 504 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 SYT12Q8IV01 421 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 SLC22A15Q8IZD6 547 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 CCDC63Q8NA47 563 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 SUMF1Q8NBK3 374 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 DENND1AQ8TEH3 1009 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 GLMNQ92990 594 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 EXT2Q93063 718 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 PDLIM5Q96HC4 596 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 PAIP2Q9BPZ3 127 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 WWP1Q9H0M0 922 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 PRDM8Q9NQV8 689 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 SNX11Q9Y5W9 270 aa13.81□□□□□ -0.2
HERPUD1-203ENST00000379792 VPS13AQ96RL7 3174 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 PATE3B3GLJ2 98 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 CFIP05156 583 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 ENO3P13929 434 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 CTSEP14091 401 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 ACTR1BP42025 376 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 CLCNKAP51800 687 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 WDR4P57081 412 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 ACTR1AP61163 376 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 ATP6V0D1P61421 351 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 ACAP2Q15057 778 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 CCDC6Q16204 474 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 TECRLQ5HYJ1 363 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 LVRNQ6Q4G3 990 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 NRROSQ86YC3 692 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 TMEM151AQ8N4L1 468 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 DLG3Q92796 817 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 SKA1Q96BD8 255 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 OR52A5Q9H2C5 316 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 TRNAU1APQ9NX07 287 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 UTP6Q9NYH9 597 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 NKIRAS1Q9NYS0 192 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 XPR1Q9UBH6 696 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 TBC1D29Q9UFV1 150 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 APOBEC3BQ9UH17 382 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 WDR37Q9Y2I8 494 aa13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 CFAP20Q9Y6A4 193 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-203ENST00000379792 WDR91A4D1P6 747 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 KRT87PA6NCN2 255 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 PRR19A6NJB7 356 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 PRR5-ARHGAP8B1AHC4 643 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 ZWINTO95229 277 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 EML2O95834 649 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 CSF2P04141 144 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 SBK3P0C264 359 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 CHN1P15882 459 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 DMPKQ09013 629 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms