RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 COMMD8Q9NX08 183 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 IFT80Q9P2H3 777 aaPredicted RBP12.72□□□□□ -0.37
USP11-204ENST00000377107 VPS51Q9UID3 782 aa12.72□□□□□ -0.37
USP11-204ENST00000377107 J3QRK9 145 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 PRKD3O94806 890 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 CA5AP35218 305 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 PSMD7P51665 324 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 CHRNA6Q15825 494 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 CRY1Q16526 586 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 HACD2Q6Y1H2 254 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 ADAMTSL2Q86TH1 951 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 ITIH5Q86UX2 942 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 FBXL8Q96CD0 374 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 FAM120BQ96EK7 910 aaKnown RBP12.71□□□□□ -0.37
USP11-204ENST00000377107 BBS2Q9BXC9 721 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 EBPLQ9BY08 206 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 RBM38Q9H0Z9 239 aaKnown RBP12.71□□□□□ -0.37
USP11-204ENST00000377107 DOLKQ9UPQ8 538 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 VNN2O95498 520 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 CPSF4O95639 269 aaKnown RBP12.71□□□□□ -0.37
USP11-204ENST00000377107 OTCP00480 354 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 PTGER3P43115 390 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 TUFMP49411 452 aaKnown RBP12.71□□□□□ -0.37
USP11-204ENST00000377107 CDK9P50750 372 aaKnown RBP12.71□□□□□ -0.37
USP11-204ENST00000377107 RING1Q06587 406 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 CACHD1Q5VU97 1274 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 SELENOMQ8WWX9 145 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 CNOT11Q9UKZ1 510 aaKnown RBP12.71□□□□□ -0.37
USP11-204ENST00000377107 TBC1D30Q9Y2I9 924 aa12.71□□□□□ -0.37
USP11-204ENST00000377107 ILVBLA1L0T0 632 aa12.71□□□□□ -0.38
USP11-204ENST00000377107 FKBP9O95302 570 aa12.71□□□□□ -0.38
USP11-204ENST00000377107 MATN4O95460 622 aa12.71□□□□□ -0.38
USP11-204ENST00000377107 ESR1P03372 595 aa12.71□□□□□ -0.38
USP11-204ENST00000377107 ZNF182P17025 639 aaPredicted RBP12.71□□□□□ -0.38
USP11-204ENST00000377107 VARSP26640 1264 aaKnown RBP12.71□□□□□ -0.38
USP11-204ENST00000377107 ALDH4A1P30038 563 aa12.71□□□□□ -0.38
USP11-204ENST00000377107 STK19P49842 368 aaPredicted RBP12.71□□□□□ -0.38
USP11-204ENST00000377107 CLCN2P51788 898 aa12.71□□□□□ -0.38
USP11-204ENST00000377107 CYP4F8P98187 520 aa12.71□□□□□ -0.38
USP11-204ENST00000377107 SIM2Q14190 667 aaPredicted RBP12.71□□□□□ -0.38
USP11-204ENST00000377107 RFLNAQ6ZTI6 216 aa12.71□□□□□ -0.38
USP11-204ENST00000377107 FKBP9P1Q75LS8 142 aa12.71□□□□□ -0.38
USP11-204ENST00000377107 ELOVL6Q9H5J4 265 aa12.71□□□□□ -0.38
USP11-204ENST00000377107 ARMC7Q9H6L4 198 aa12.71□□□□□ -0.38
USP11-204ENST00000377107 G3V2T6 193 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 ATE1O95260 518 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 TSPAN12O95859 305 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 HRH2P25021 359 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 HALP42357 657 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 SP3Q02447 781 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 ACVR1Q04771 509 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 CACNG1Q06432 222 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 DGCR6Q14129 220 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 RAB39AQ14964 217 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 MEP1AQ16819 746 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 TRIM71Q2Q1W2 868 aaKnown RBP12.7□□□□□ -0.38
USP11-204ENST00000377107 ANKDD1AQ495B1 522 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 SLC13A3Q8WWT9 602 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 KCNJ9Q92806 393 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 ARIH1Q9Y4X5 557 aaPredicted RBP12.7□□□□□ -0.38
USP11-204ENST00000377107 CPQQ9Y646 472 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 TDRD15B5MCY1 1934 aaKnown RBP12.7□□□□□ -0.38
USP11-204ENST00000377107 A0A1W2PQ45 241 aaPredicted RBP12.7□□□□□ -0.38
USP11-204ENST00000377107 A0A1W2PQY0 241 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 EEDO75530 441 aaKnown RBP12.7□□□□□ -0.38
USP11-204ENST00000377107 GLUD1P00367 558 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 TCF3P15923 654 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 AQP1P29972 269 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 POLR2IP36954 125 aaKnown RBP12.7□□□□□ -0.38
USP11-204ENST00000377107 IL5RAQ01344 420 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 SF1Q15637 639 aaKnown RBP12.7□□□□□ -0.38
USP11-204ENST00000377107 ZNF555Q8NEP9 628 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 APOLD1Q96LR9 279 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 ABCD2Q9UBJ2 740 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 TET1Q8NFU7 2136 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 DICER1Q9UPY3 1922 aaKnown RBP12.7□□□□□ -0.38
USP11-204ENST00000377107 RGS14O43566 566 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 RASAL1O95294 804 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 WISP3O95389 354 aaPredicted RBP12.7□□□□□ -0.38
USP11-204ENST00000377107 RPLP2P05387 115 aaKnown RBP12.7□□□□□ -0.38
USP11-204ENST00000377107 SELPP16109 830 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 EPB42P16452 691 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 ATP6AP1Q15904 470 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 ERI1Q8IV48 349 aaKnown RBP12.7□□□□□ -0.38
USP11-204ENST00000377107 EID2BQ96D98 161 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 MYOCQ99972 504 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 FEM1AQ9BSK4 669 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 HSFX1Q9UBD0 423 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 BAG5Q9UL15 447 aa12.7□□□□□ -0.38
USP11-204ENST00000377107 TOR1BO14657 336 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 STX16O14662 325 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 TBC1D4O60343 1298 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 NTRK1P04629 796 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 THRBP10828 461 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 PSMD8P48556 350 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 FAM189BP81408 668 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 USP41Q3LFD5 358 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 ZFAND4Q86XD8 727 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 RGL4Q8IZJ4 473 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 GAB3Q8WWW8 586 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms