RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 SRMSQ9H3Y6 488 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 ACSS2Q9NR19 701 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 FKBPLQ9UIM3 349 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 PCDHGB7Q9Y5F8 929 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 PCDHA3Q9Y5H8 950 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 UBR5O95071 2799 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-204ENST00000376643 OR6C74A6NCV1 312 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 KCNN4O15554 427 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 GPR39O43194 453 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 HBQ1P09105 142 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 RAB40ALP0C0E4 278 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 VARSP26640 1264 aaKnown RBP14.37□□□□□ -0.11
HDAC6-204ENST00000376643 PSMB4P28070 264 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 ADRA1AP35348 466 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 PGDP52209 483 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 OTUD4Q01804 1114 aaKnown RBP14.37□□□□□ -0.11
HDAC6-204ENST00000376643 KCNAB1Q14722 419 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 P3H1Q32P28 736 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 CAPRIN2Q6IMN6 1127 aaKnown RBP14.37□□□□□ -0.11
HDAC6-204ENST00000376643 HOOK3Q86VS8 718 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 CFAP206Q8IYR0 622 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 EFCAB3Q8N7B9 438 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 TC2NQ8N9U0 490 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 LCN9Q8WX39 176 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 MR1Q95460 341 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 TBL1YQ9BQ87 522 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 DPH2Q9BQC3 489 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-204ENST00000376643 MVB12BQ9H7P6 319 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 ARNT2Q9HBZ2 717 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 SERTAD3Q9UJW9 196 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 TLK1Q9UKI8 766 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 POMT2Q9UKY4 750 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 FARSAQ9Y285 508 aaKnown RBP14.37□□□□□ -0.11
HDAC6-204ENST00000376643 PADI2Q9Y2J8 665 aa14.37□□□□□ -0.11
HDAC6-204ENST00000376643 PCDHGA9Q9Y5G4 932 aaKnown RBP14.37□□□□□ -0.11
HDAC6-204ENST00000376643 CFAP20Q9Y6A4 193 aaKnown RBP14.37□□□□□ -0.11
HDAC6-204ENST00000376643 BTNL10A8MVZ5 291 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 PSMD3O43242 534 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 KLHL41O60662 606 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 CD63P08962 238 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 MARCKSL1P49006 195 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 ZNF140P52738 457 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-204ENST00000376643 PPP1CAP62136 330 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 PLOD1Q02809 727 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-204ENST00000376643 LAMB3Q13751 1172 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 ARHGEF18Q6ZSZ5 1173 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 TMTC1Q8IUR5 882 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 FAM26EQ8N5C1 309 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 UBL4BQ8N7F7 174 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 KRT35Q92764 455 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 ZNF501Q96CX3 271 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-204ENST00000376643 PANX2Q96RD6 677 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 GOLPH3Q9H4A6 298 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 ZDHHC3Q9NYG2 299 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 ANKMY1Q9P2S6 941 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 SNX7Q9UNH6 387 aa14.36□□□□□ -0.11
HDAC6-204ENST00000376643 GSAPA4D1B5 854 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 C2orf74A8MZ97 194 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 C9J4A7 227 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 H7C0S8 307 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 VPS4BO75351 444 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 AP2A2O94973 939 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 TIAF1O95411 115 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 GAS8O95995 478 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 POLBP06746 335 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 CYP2A7P20853 494 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 PREPP48147 710 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 CD97P48960 835 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 KPNA2P52292 529 aaKnown RBP14.35□□□□□ -0.11
HDAC6-204ENST00000376643 RRADP55042 308 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 XIAPP98170 497 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 FAM182AQ5T1J6 154 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 ZNF517Q6ZMY9 492 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-204ENST00000376643 SYCE1Q8N0S2 351 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 OR4E2Q8NGC2 313 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 N4BP2L2Q92802 583 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-204ENST00000376643 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC6-204ENST00000376643 MIB2Q96AX9 1013 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 CLIP3Q96DZ5 547 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 RMDN2Q96LZ7 410 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 FERD3LQ96RJ6 166 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 TTC1Q99614 292 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 DHRS4Q9BTZ2 278 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 SLC25A23Q9BV35 468 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 TFB2MQ9H5Q4 396 aaKnown RBP14.35□□□□□ -0.11
HDAC6-204ENST00000376643 LRRC40Q9H9A6 602 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 COG4Q9H9E3 785 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 FAM8A1Q9UBU6 413 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 VPS4AQ9UN37 437 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 ZNF451Q9Y4E5 1061 aa14.35□□□□□ -0.11
HDAC6-204ENST00000376643 HECTD1Q9ULT8 2610 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 MIF4GDA9UHW6 222 aaKnown RBP14.34□□□□□ -0.11
HDAC6-204ENST00000376643 MEN1O00255 615 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 IGHEP01854 428 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 FTH1P02794 183 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 FURINP09958 794 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 POLR2CP19387 275 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-204ENST00000376643 AGXTP21549 392 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 ACRV1P26436 265 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 MC4RP32245 332 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms