RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 RPS6KA6Q9UK32 745 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 BUD31P41223 144 aaPredicted RBP17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 CLCNKAP51800 687 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 OR10A6Q8NH74 314 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 LMLNQ96KR4 655 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 DDX6P26196 483 aaKnown RBP eCLIP17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 RPL3P39023 403 aaKnown RBP17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 PREPP48147 710 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 PCLAFQ15004 111 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 REP15Q6BDI9 236 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 TMEM135Q86UB9 458 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 UBR7Q8N806 425 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 OVCA2Q8WZ82 227 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 TADA1Q96BN2 335 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 PCDHAC1Q9H158 963 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 FBRSL1Q9HCM7 1045 aaKnown RBP17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 C1orf109Q9NX04 203 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 ZNF232Q9UNY5 417 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 AP3M1Q9Y2T2 418 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 MAP4K5Q9Y4K4 846 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 MARF1Q9Y4F3 1742 aaKnown RBP17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 URADA6NGE7 173 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 KERAO60938 352 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 TIMP1P01033 207 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 HNF1BP35680 557 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 NUP107P57740 925 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 CLVS1Q8IUQ0 354 aaPredicted RBP17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 MAPRE3Q9UPY8 281 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 PCDHGA11Q9Y5H2 935 aa17.67■□□□□ 0.42
PTPDC1-202ENST00000375360 STX16-NPEPL1H3BU86 382 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 KRT75O95678 551 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 TGFB1P01137 390 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 PRSS56P0CW18 603 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 ATP1B2P14415 290 aaPredicted RBP17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 MAPK12P53778 367 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 COL9A2Q14055 689 aaPredicted RBP17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 GSTA3Q16772 222 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 LPCAT2Q7L5N7 544 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 C2CD4AQ8NCU7 369 aaPredicted RBP17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 PHF10Q8WUB8 498 aaKnown RBP17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 CASD1Q96PB1 797 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 ARMC7Q9H6L4 198 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 MOCS1Q9NZB8 636 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 COL22A1Q8NFW1 1626 aaPredicted RBP17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 MTPNP58546 118 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 CYP2U1Q7Z449 544 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 ZCCHC10Q8TBK6 192 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 FBXW2Q9UKT8 454 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 FPGTO14772 594 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 SLC28A2O43868 658 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 STATHP02808 62 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 EPCAMP16422 314 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 CD68P34810 354 aaPredicted RBP17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 DGKEP52429 567 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 IRGCQ6NXR0 463 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 APOL4Q9BPW4 351 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 DDX18Q9NVP1 670 aaKnown RBP17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 MTMR10Q9NXD2 777 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 ZNF780BQ9Y6R6 833 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 BBIP1A8MTZ0 92 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 LDB2O43679 373 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 PGLSO95336 258 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 CYP4B1P13584 511 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 VIPR1P32241 457 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 AGTR2P50052 363 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 PTCHD3Q3KNS1 767 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 TXNDC5Q8NBS9 432 aaKnown RBP17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 RSPH9Q9H1X1 276 aaPredicted RBP17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 S100A14Q9HCY8 104 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 RAPGEFL1Q9UHV5 662 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 KCNK6Q9Y257 313 aa17.66■□□□□ 0.42
PTPDC1-202ENST00000375360 SNTNA6NMZ2 147 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 CD70P32970 193 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 ETV3P41162 512 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 ANXA8L1Q5VT79 327 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 WASF2Q9Y6W5 498 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 KRT87PA6NCN2 255 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 PI15O43692 258 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 RPS14P62263 151 aaKnown RBP17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 ZSCAN5AQ9BUG6 496 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 POMPQ9Y244 141 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 ANGPT4Q9Y264 503 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 NRAPQ86VF7 1730 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 SUV39H1O43463 412 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 SEC24AO95486 1093 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 APOA1P02647 267 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 FYNP06241 537 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 CTSAP10619 480 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 CDH3P22223 829 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 CST5P28325 142 aaPredicted RBP17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 DGKQP52824 942 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 SLC18A1P54219 525 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 PDK3Q15120 406 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 ZNF648Q5T619 568 aaPredicted RBP17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 PSAPL1Q6NUJ1 521 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 ALKAL1Q6UXT8 129 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 TRIM69Q86WT6 500 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 CLSTN3Q9BQT9 956 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 ALG2Q9H553 416 aa17.65■□□□□ 0.42
PTPDC1-202ENST00000375360 COLEC10Q9Y6Z7 277 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms