RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 LBPP18428 481 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 TRAP1Q12931 704 aaKnown RBP15.29■□□□□ 0.04
CCDC40-202ENST00000374876 GRB7Q14451 532 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 PDK3Q15120 406 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 PTPRRQ15256 657 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 RPS6KA2Q15349 733 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 MAP7D1Q3KQU3 841 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 TSSK4Q6SA08 328 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 LILRA2Q8N149 483 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 ADCY4Q8NFM4 1077 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 WFIKKN2Q8TEU8 576 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 KCNJ9Q92806 393 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 LINGO1Q96FE5 620 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 RPL10LQ96L21 214 aaKnown RBP15.29■□□□□ 0.04
CCDC40-202ENST00000374876 GBP5Q96PP8 586 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 PKP2Q99959 881 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 TUBB1Q9H4B7 451 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 Q9H521 79 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 TMEM181Q9P2C4 612 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 POLG2Q9UHN1 485 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 OR51B4Q9Y5P0 310 aa15.29■□□□□ 0.04
CCDC40-202ENST00000374876 CHURC1-FNTBB4DL54 471 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 H7C0S8 307 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 STAMBPO95630 424 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 CD9P21926 228 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 IL12RB1P42701 662 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 PTGER3P43115 390 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 CXCL12P48061 93 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 ZNF234Q14588 700 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 GPSM1Q86YR5 675 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 PHYKPLQ8IUZ5 450 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 ST13P4Q8IZP2 240 aaPredicted RBP15.28■□□□□ 0.04
CCDC40-202ENST00000374876 ZNF366Q8N895 744 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 CD200R1Q8TD46 325 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 EEF1AKMT1Q8WVE0 214 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 GPR63Q9BZJ6 419 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 SARS2Q9NP81 518 aaKnown RBP15.28■□□□□ 0.04
CCDC40-202ENST00000374876 THAP10Q9P2Z0 257 aaPredicted RBP15.28■□□□□ 0.04
CCDC40-202ENST00000374876 TMCO1Q9UM00 188 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 FCF1Q9Y324 198 aaKnown RBP15.28■□□□□ 0.04
CCDC40-202ENST00000374876 COMMD10Q9Y6G5 202 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 ZNF318Q5VUA4 2279 aa15.28■□□□□ 0.04
CCDC40-202ENST00000374876 A0A0U1RQS6 177 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 A0A1B0GTL3 188 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 GIPC1O14908 333 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 ANGPT2O15123 496 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 ATG13O75143 517 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 MLYCDO95822 493 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 TSPAN12O95859 305 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 CHEK2O96017 543 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 ESR1P03372 595 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 C8BP07358 591 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 HLA-EP13747 358 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 IDO1P14902 403 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 SLC7A2P52569 658 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 EIF4HQ15056 248 aaKnown RBP15.27■□□□□ 0.04
CCDC40-202ENST00000374876 RBBP7Q16576 425 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 ATXN7L2Q5T6C5 722 aaPredicted RBP15.27■□□□□ 0.04
CCDC40-202ENST00000374876 IL23RQ5VWK5 629 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 UGT3A1Q6NUS8 523 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 C8orf82Q6P1X6 216 aaPredicted RBP15.27■□□□□ 0.04
CCDC40-202ENST00000374876 TMEM92Q6UXU6 159 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 EFL1Q7Z2Z2 1120 aaKnown RBP15.27■□□□□ 0.04
CCDC40-202ENST00000374876 MAML2Q8IZL2 1156 aaPredicted RBP15.27■□□□□ 0.04
CCDC40-202ENST00000374876 STK40Q8N2I9 435 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 PHC3Q8NDX5 983 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 PIP4K2CQ8TBX8 421 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 ATP6V1E2Q96A05 226 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 HGH1Q9BTY7 390 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 C1QTNF3Q9BXJ4 246 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 CD274Q9NZQ7 290 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 CD300AQ9UGN4 299 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 VPS51Q9UID3 782 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 SLCO3A1Q9UIG8 710 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 NDUFAF1Q9Y375 327 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 ZNF711Q9Y462 761 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 AP4S1Q9Y587 144 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 SLC30A1Q9Y6M5 507 aa15.27■□□□□ 0.04
CCDC40-202ENST00000374876 LAMTOR5O43504 91 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 KLK8O60259 260 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 ESRRBO95718 433 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 NTSR1P30989 418 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 STK19P49842 368 aaPredicted RBP15.27■□□□□ 0.03
CCDC40-202ENST00000374876 AGTR2P50052 363 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 ADARP55265 1226 aaKnown RBP15.27■□□□□ 0.03
CCDC40-202ENST00000374876 RHDQ02161 417 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 CACNG1Q06432 222 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 DMC1Q14565 340 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 VPS26BQ4G0F5 336 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 FBXL19Q6PCT2 694 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 CPNE9Q8IYJ1 553 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 ZNF483Q8TF39 744 aaPredicted RBP15.27■□□□□ 0.03
CCDC40-202ENST00000374876 TRAPPC9Q96Q05 1148 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 SLC39A3Q9BRY0 314 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 SDR39U1Q9NRG7 319 aaPredicted RBP15.27■□□□□ 0.03
CCDC40-202ENST00000374876 PCTPQ9UKL6 214 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 MMP17Q9ULZ9 603 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 ERVW-1Q9UQF0 538 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 TIMM22Q9Y584 194 aa15.27■□□□□ 0.03
CCDC40-202ENST00000374876 STON1Q9Y6Q2 735 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms