RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 A0A087WUV0 522 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 CPED1A4D0V7 1026 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 E5RI56 91 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 EIF3FO00303 357 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 IFRD1O00458 451 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 PPM1DO15297 605 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 RIPK2O43353 540 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 VPS26AO75436 327 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 PIAS1O75925 651 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 DKK1O94907 266 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 SLC35G4P0C7Q5 338 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 CDK4P11802 303 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 MYF5P13349 255 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 ACADLP28330 430 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 NDUFS1P28331 727 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 ATP5DP30049 168 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 SPRP35270 261 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 GP5P40197 560 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 GPR3P46089 330 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 PREPP48147 710 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 ACADVLP49748 655 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 NOVA1P51513 510 aaKnown RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 MAZP56270 477 aaKnown RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 TIAL1Q01085 375 aaKnown RBP eCLIP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 HSPA14Q0VDF9 509 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 DNAJC3Q13217 504 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 BOP1Q14137 746 aaKnown RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 GBX1Q14549 363 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 NR1D2Q14995 579 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 SEPT7Q16181 437 aaKnown RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 TTLL9Q3SXZ7 439 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 SYTL3Q4VX76 610 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 RBM20Q5T481 1227 aaKnown RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 UBAP2Q5T6F2 1119 aaKnown RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 FAM45BPQ6NSW5 357 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 UGT3A1Q6NUS8 523 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 EMBQ6PCB8 327 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 NAPRTQ6XQN6 538 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 ZNF438Q7Z4V0 828 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 PDZD3Q86UT5 571 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 RBM12BQ8IXT5 1001 aaKnown RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 GSPT2Q8IYD1 628 aaKnown RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 ZBTB2Q8N680 514 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 FAM45AQ8TCE6 357 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 SH3KBP1Q96B97 665 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 RMDN2Q96LZ7 410 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 RBBP8Q99708 897 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 STN1Q9H668 368 aaKnown RBP11.11□□□□□ -0.63
HSPG2-202ENST00000374676 SLC40A1Q9NP59 571 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 POT1Q9NUX5 634 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 TOR4AQ9NXH8 423 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 TAS2R13Q9NYV9 303 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 TXNDC16Q9P2K2 825 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 LRIT1Q9P2V4 623 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 GALPQ9UBC7 116 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 PSMD13Q9UNM6 376 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 HEBP2Q9Y5Z4 205 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 RNF215Q9Y6U7 377 aa11.11□□□□□ -0.63
HSPG2-202ENST00000374676 DCDC2BA2VCK2 349 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 OR52A4PA6NMU1 304 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 RHPN2P1A8MT19 583 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 GIPC1O14908 333 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 ZW10O43264 779 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 VIPP01282 170 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 MTHFD1P11586 935 aaKnown RBP11.1□□□□□ -0.63
HSPG2-202ENST00000374676 FDXRP22570 491 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 ABCG1P45844 678 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 E2F1Q01094 437 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 POU4F1Q01851 419 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 HHEXQ03014 270 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 BRD3Q15059 726 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 KLHL38Q2WGJ6 581 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 HECTD2Q5U5R9 776 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 GUSBP11Q6P575 273 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 TMEM26Q6ZUK4 368 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 NEK10Q6ZWH5 1172 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 EFL1Q7Z2Z2 1120 aaKnown RBP11.1□□□□□ -0.63
HSPG2-202ENST00000374676 TRIM48Q8IWZ4 208 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 GPATCH11Q8N954 259 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-202ENST00000374676 IFI44Q8TCB0 444 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 CD200R1Q8TD46 325 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 AENQ8WTP8 325 aaKnown RBP11.1□□□□□ -0.63
HSPG2-202ENST00000374676 TFGQ92734 400 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-202ENST00000374676 CXorf40BQ96DE9 158 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 VPS39Q96JC1 886 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 C12orf66Q96MD2 445 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 NDNQ99608 321 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 GPR21Q99679 349 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-202ENST00000374676 EPB41L4BQ9H329 900 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 MVB12BQ9H7P6 319 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 APOBEC2Q9Y235 224 aaKnown RBP11.1□□□□□ -0.63
HSPG2-202ENST00000374676 MTO1Q9Y2Z2 717 aaKnown RBP11.1□□□□□ -0.63
HSPG2-202ENST00000374676 COLEC10Q9Y6Z7 277 aa11.1□□□□□ -0.63
HSPG2-202ENST00000374676 PCM1Q15154 2024 aa11.09□□□□□ -0.63
HSPG2-202ENST00000374676 SPAARA0A1B0GVQ0 90 aa11.09□□□□□ -0.63
HSPG2-202ENST00000374676 FAM95CA0A1B0GW59 222 aa11.09□□□□□ -0.63
HSPG2-202ENST00000374676 RFPL3O75679 317 aa11.09□□□□□ -0.63
HSPG2-202ENST00000374676 FTH1P19P0C7X4 201 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms